Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS13BQ7Z7G8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS13BQ7Z7G8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS13BQ7Z7G8 AL031258.1-201ENST00000623562 325 ntBASIC18.45■□□□□ 0.54
VPS13BQ7Z7G8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS13BQ7Z7G8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS13BQ7Z7G8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
VPS13BQ7Z7G8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS13BQ7Z7G8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS13BQ7Z7G8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC18.42■□□□□ 0.54
VPS13BQ7Z7G8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
VPS13BQ7Z7G8 AC136428.2-201ENST00000563187 214 ntBASIC18.4■□□□□ 0.54
VPS13BQ7Z7G8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS13BQ7Z7G8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VPS13BQ7Z7G8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VPS13BQ7Z7G8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS13BQ7Z7G8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS13BQ7Z7G8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
VPS13BQ7Z7G8 RPS2P35-201ENST00000443417 897 ntBASIC18.34■□□□□ 0.53
VPS13BQ7Z7G8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS13BQ7Z7G8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS13BQ7Z7G8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
VPS13BQ7Z7G8 SUZ12P1-203ENST00000578195 985 ntBASIC18.27■□□□□ 0.52
VPS13BQ7Z7G8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
VPS13BQ7Z7G8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS13BQ7Z7G8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS13BQ7Z7G8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS13BQ7Z7G8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS13BQ7Z7G8 AC097358.2-201ENST00000607541 1159 ntBASIC18.19■□□□□ 0.5
VPS13BQ7Z7G8 SETD8P1-201ENST00000623146 1180 ntBASIC18.17■□□□□ 0.5
VPS13BQ7Z7G8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS13BQ7Z7G8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS13BQ7Z7G8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS13BQ7Z7G8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.15■□□□□ 0.5
VPS13BQ7Z7G8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13BQ7Z7G8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VPS13BQ7Z7G8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS13BQ7Z7G8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS13BQ7Z7G8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS13BQ7Z7G8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.08■□□□□ 0.49
VPS13BQ7Z7G8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13BQ7Z7G8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS13BQ7Z7G8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS13BQ7Z7G8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VPS13BQ7Z7G8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13BQ7Z7G8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.05■□□□□ 0.48
VPS13BQ7Z7G8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.05■□□□□ 0.48
VPS13BQ7Z7G8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS13BQ7Z7G8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS13BQ7Z7G8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS13BQ7Z7G8 AL162393.1-201ENST00000437852 946 ntBASIC18.01■□□□□ 0.47
VPS13BQ7Z7G8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS13BQ7Z7G8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VPS13BQ7Z7G8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
VPS13BQ7Z7G8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.96■□□□□ 0.47
VPS13BQ7Z7G8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS13BQ7Z7G8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.95■□□□□ 0.46
VPS13BQ7Z7G8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS13BQ7Z7G8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS13BQ7Z7G8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS13BQ7Z7G8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS13BQ7Z7G8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS13BQ7Z7G8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
VPS13BQ7Z7G8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS13BQ7Z7G8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS13BQ7Z7G8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS13BQ7Z7G8 CAHM-201ENST00000604200 896 ntBASIC17.85■□□□□ 0.45
VPS13BQ7Z7G8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS13BQ7Z7G8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS13BQ7Z7G8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS13BQ7Z7G8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VPS13BQ7Z7G8 AC145285.7-201ENST00000614819 1539 ntBASIC17.8■□□□□ 0.44
VPS13BQ7Z7G8 AL391121.1-201ENST00000607967 1349 ntBASIC17.8■□□□□ 0.44
VPS13BQ7Z7G8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS13BQ7Z7G8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS13BQ7Z7G8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS13BQ7Z7G8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS13BQ7Z7G8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS13BQ7Z7G8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS13BQ7Z7G8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS13BQ7Z7G8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS13BQ7Z7G8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS13BQ7Z7G8 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.75■□□□□ 0.43
VPS13BQ7Z7G8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS13BQ7Z7G8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS13BQ7Z7G8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VPS13BQ7Z7G8 AP006261.1-201ENST00000584783 668 ntBASIC17.74■□□□□ 0.43
VPS13BQ7Z7G8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS13BQ7Z7G8 HLA-V-202ENST00000446817 847 ntBASIC17.72■□□□□ 0.43
VPS13BQ7Z7G8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
VPS13BQ7Z7G8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS13BQ7Z7G8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS13BQ7Z7G8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS13BQ7Z7G8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS13BQ7Z7G8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS13BQ7Z7G8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.69■□□□□ 0.42
VPS13BQ7Z7G8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS13BQ7Z7G8 ABHD17AP4-201ENST00000411545 909 ntBASIC17.66■□□□□ 0.42
VPS13BQ7Z7G8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13BQ7Z7G8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms