Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL031258.1-201ENST00000623562 325 ntBASIC34.5■■■■□ 3.11
SHROOM1Q2M3G4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
SHROOM1Q2M3G4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
SHROOM1Q2M3G4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
SHROOM1Q2M3G4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC34.39■■■■□ 3.1
SHROOM1Q2M3G4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
SHROOM1Q2M3G4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SHROOM1Q2M3G4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC34.33■■■■□ 3.09
SHROOM1Q2M3G4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SHROOM1Q2M3G4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SHROOM1Q2M3G4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC34.23■■■■□ 3.07
SHROOM1Q2M3G4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC34.23■■■■□ 3.07
SHROOM1Q2M3G4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
SHROOM1Q2M3G4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC34.18■■■■□ 3.06
SHROOM1Q2M3G4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
SHROOM1Q2M3G4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
SHROOM1Q2M3G4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
SHROOM1Q2M3G4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC34.08■■■■□ 3.05
SHROOM1Q2M3G4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC34.05■■■■□ 3.04
SHROOM1Q2M3G4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
SHROOM1Q2M3G4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
SHROOM1Q2M3G4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
SHROOM1Q2M3G4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.99■■■■□ 3.03
SHROOM1Q2M3G4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.98■■■■□ 3.03
SHROOM1Q2M3G4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.98■■■■□ 3.03
SHROOM1Q2M3G4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.96■■■■□ 3.03
SHROOM1Q2M3G4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC33.94■■■■□ 3.02
SHROOM1Q2M3G4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.94■■■■□ 3.02
SHROOM1Q2M3G4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.91■■■■□ 3.02
SHROOM1Q2M3G4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
SHROOM1Q2M3G4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC33.9■■■■□ 3.02
SHROOM1Q2M3G4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.89■■■■□ 3.02
SHROOM1Q2M3G4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
SHROOM1Q2M3G4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.83■■■■□ 3.01
SHROOM1Q2M3G4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.82■■■■□ 3
SHROOM1Q2M3G4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
SHROOM1Q2M3G4 RARRES2P7-201ENST00000567349 469 ntBASIC33.78■■■■□ 3
SHROOM1Q2M3G4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.77■■■■□ 3
SHROOM1Q2M3G4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
SHROOM1Q2M3G4 AC145285.7-201ENST00000614819 1539 ntBASIC33.75■■■□□ 2.99
SHROOM1Q2M3G4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.75■■■□□ 2.99
SHROOM1Q2M3G4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC33.72■■■□□ 2.99
SHROOM1Q2M3G4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
SHROOM1Q2M3G4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
SHROOM1Q2M3G4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.7■■■□□ 2.99
SHROOM1Q2M3G4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
SHROOM1Q2M3G4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
SHROOM1Q2M3G4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC33.65■■■□□ 2.98
SHROOM1Q2M3G4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC33.6■■■□□ 2.97
SHROOM1Q2M3G4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC33.6■■■□□ 2.97
SHROOM1Q2M3G4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC33.59■■■□□ 2.97
SHROOM1Q2M3G4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.58■■■□□ 2.97
SHROOM1Q2M3G4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.58■■■□□ 2.97
SHROOM1Q2M3G4 AC136428.2-201ENST00000563187 214 ntBASIC33.58■■■□□ 2.97
SHROOM1Q2M3G4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC33.58■■■□□ 2.97
SHROOM1Q2M3G4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC33.58■■■□□ 2.97
SHROOM1Q2M3G4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC33.57■■■□□ 2.96
SHROOM1Q2M3G4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
SHROOM1Q2M3G4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
SHROOM1Q2M3G4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC33.54■■■□□ 2.96
SHROOM1Q2M3G4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
SHROOM1Q2M3G4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.53■■■□□ 2.96
SHROOM1Q2M3G4 AC097358.2-201ENST00000607541 1159 ntBASIC33.53■■■□□ 2.96
SHROOM1Q2M3G4 SETD8P1-201ENST00000623146 1180 ntBASIC33.53■■■□□ 2.96
SHROOM1Q2M3G4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC33.47■■■□□ 2.95
SHROOM1Q2M3G4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
SHROOM1Q2M3G4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
SHROOM1Q2M3G4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC33.44■■■□□ 2.94
SHROOM1Q2M3G4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.44■■■□□ 2.94
SHROOM1Q2M3G4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
SHROOM1Q2M3G4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
SHROOM1Q2M3G4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC33.42■■■□□ 2.94
SHROOM1Q2M3G4 MVK-208ENST00000539696 608 ntTSL 5 BASIC33.4■■■□□ 2.94
SHROOM1Q2M3G4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC33.39■■■□□ 2.94
SHROOM1Q2M3G4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
SHROOM1Q2M3G4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
SHROOM1Q2M3G4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC33.37■■■□□ 2.93
SHROOM1Q2M3G4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC33.36■■■□□ 2.93
SHROOM1Q2M3G4 SUZ12P1-203ENST00000578195 985 ntBASIC33.36■■■□□ 2.93
SHROOM1Q2M3G4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
SHROOM1Q2M3G4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
SHROOM1Q2M3G4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC33.32■■■□□ 2.92
SHROOM1Q2M3G4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SHROOM1Q2M3G4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SHROOM1Q2M3G4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.23■■■□□ 2.91
SHROOM1Q2M3G4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
SHROOM1Q2M3G4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC33.21■■■□□ 2.91
SHROOM1Q2M3G4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC33.2■■■□□ 2.9
SHROOM1Q2M3G4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SHROOM1Q2M3G4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SHROOM1Q2M3G4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SHROOM1Q2M3G4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.16■■■□□ 2.9
SHROOM1Q2M3G4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SHROOM1Q2M3G4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SHROOM1Q2M3G4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SHROOM1Q2M3G4 CAHM-201ENST00000604200 896 ntBASIC33.13■■■□□ 2.89
SHROOM1Q2M3G4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SHROOM1Q2M3G4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.13■■■□□ 2.89
SHROOM1Q2M3G4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SHROOM1Q2M3G4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms