Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CNTNAP1P78357 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC35.68■■■■□ 3.3
CNTNAP1P78357 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC35.68■■■■□ 3.3
CNTNAP1P78357 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC35.65■■■■□ 3.3
CNTNAP1P78357 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC35.64■■■■□ 3.3
CNTNAP1P78357 AL031258.1-201ENST00000623562 325 ntBASIC35.64■■■■□ 3.3
CNTNAP1P78357 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC35.63■■■■□ 3.29
CNTNAP1P78357 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
CNTNAP1P78357 RPS2P35-201ENST00000443417 897 ntBASIC35.6■■■■□ 3.29
CNTNAP1P78357 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC35.56■■■■□ 3.28
CNTNAP1P78357 RARRES2P7-201ENST00000567349 469 ntBASIC35.55■■■■□ 3.28
CNTNAP1P78357 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC35.55■■■■□ 3.28
CNTNAP1P78357 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CNTNAP1P78357 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC35.54■■■■□ 3.28
CNTNAP1P78357 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
CNTNAP1P78357 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC35.5■■■■□ 3.27
CNTNAP1P78357 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC35.44■■■■□ 3.26
CNTNAP1P78357 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC35.42■■■■□ 3.26
CNTNAP1P78357 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
CNTNAP1P78357 AC097358.2-201ENST00000607541 1159 ntBASIC35.38■■■■□ 3.26
CNTNAP1P78357 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CNTNAP1P78357 SUZ12P1-203ENST00000578195 985 ntBASIC35.3■■■■□ 3.24
CNTNAP1P78357 AC136428.2-201ENST00000563187 214 ntBASIC35.28■■■■□ 3.24
CNTNAP1P78357 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CNTNAP1P78357 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CNTNAP1P78357 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC35.17■■■■□ 3.22
CNTNAP1P78357 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC35.16■■■■□ 3.22
CNTNAP1P78357 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC35.13■■■■□ 3.21
CNTNAP1P78357 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC35.12■■■■□ 3.21
CNTNAP1P78357 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
CNTNAP1P78357 SETD8P1-201ENST00000623146 1180 ntBASIC35.08■■■■□ 3.21
CNTNAP1P78357 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
CNTNAP1P78357 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CNTNAP1P78357 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC35.02■■■■□ 3.2
CNTNAP1P78357 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CNTNAP1P78357 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CNTNAP1P78357 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC35■■■■□ 3.19
CNTNAP1P78357 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.98■■■■□ 3.19
CNTNAP1P78357 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CNTNAP1P78357 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CNTNAP1P78357 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC34.92■■■■□ 3.18
CNTNAP1P78357 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC34.88■■■■□ 3.17
CNTNAP1P78357 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CNTNAP1P78357 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
CNTNAP1P78357 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
CNTNAP1P78357 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC34.86■■■■□ 3.17
CNTNAP1P78357 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CNTNAP1P78357 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CNTNAP1P78357 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CNTNAP1P78357 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
CNTNAP1P78357 AL162393.1-201ENST00000437852 946 ntBASIC34.74■■■■□ 3.15
CNTNAP1P78357 KLF16-203ENST00000592313 508 ntTSL 3 BASIC34.74■■■■□ 3.15
CNTNAP1P78357 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC34.74■■■■□ 3.15
CNTNAP1P78357 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.74■■■■□ 3.15
CNTNAP1P78357 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CNTNAP1P78357 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC34.7■■■■□ 3.15
CNTNAP1P78357 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.69■■■■□ 3.14
CNTNAP1P78357 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CNTNAP1P78357 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CNTNAP1P78357 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CNTNAP1P78357 EBPL-203ENST00000378270 579 ntTSL 2 BASIC34.64■■■■□ 3.14
CNTNAP1P78357 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.64■■■■□ 3.14
CNTNAP1P78357 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC34.63■■■■□ 3.13
CNTNAP1P78357 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC34.62■■■■□ 3.13
CNTNAP1P78357 ILK-212ENST00000532063 1617 ntTSL 2 BASIC34.62■■■■□ 3.13
CNTNAP1P78357 MIR7108-201ENST00000614319 87 ntBASIC34.61■■■■□ 3.13
CNTNAP1P78357 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.61■■■■□ 3.13
CNTNAP1P78357 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.6■■■■□ 3.13
CNTNAP1P78357 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CNTNAP1P78357 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CNTNAP1P78357 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CNTNAP1P78357 AP006261.1-201ENST00000584783 668 ntBASIC34.53■■■■□ 3.12
CNTNAP1P78357 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CNTNAP1P78357 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.5■■■■□ 3.11
CNTNAP1P78357 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC34.49■■■■□ 3.11
CNTNAP1P78357 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC34.48■■■■□ 3.11
CNTNAP1P78357 ABHD17AP4-201ENST00000411545 909 ntBASIC34.44■■■■□ 3.1
CNTNAP1P78357 PVT1-219ENST00000523427 938 ntTSL 3 BASIC34.4■■■■□ 3.1
CNTNAP1P78357 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CNTNAP1P78357 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC34.39■■■■□ 3.1
CNTNAP1P78357 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
CNTNAP1P78357 CAHM-201ENST00000604200 896 ntBASIC34.37■■■■□ 3.09
CNTNAP1P78357 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CNTNAP1P78357 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC34.35■■■■□ 3.09
CNTNAP1P78357 MBP-237ENST00000579129 1052 ntTSL 5 BASIC34.35■■■■□ 3.09
CNTNAP1P78357 HLA-V-202ENST00000446817 847 ntBASIC34.34■■■■□ 3.09
CNTNAP1P78357 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC34.31■■■■□ 3.08
CNTNAP1P78357 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.29■■■■□ 3.08
CNTNAP1P78357 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CNTNAP1P78357 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CNTNAP1P78357 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CNTNAP1P78357 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.25■■■■□ 3.07
CNTNAP1P78357 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CNTNAP1P78357 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CNTNAP1P78357 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
CNTNAP1P78357 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.2■■■■□ 3.07
CNTNAP1P78357 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CNTNAP1P78357 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CNTNAP1P78357 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.18■■■■□ 3.06
CNTNAP1P78357 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms