Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 AL031258.1-201ENST00000623562 325 ntBASIC31.9■■■□□ 2.7
TTC3P53804 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TTC3P53804 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TTC3P53804 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TTC3P53804 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.83■■■□□ 2.69
TTC3P53804 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.83■■■□□ 2.69
TTC3P53804 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
TTC3P53804 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.76■■■□□ 2.68
TTC3P53804 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.73■■■□□ 2.67
TTC3P53804 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TTC3P53804 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.72■■■□□ 2.67
TTC3P53804 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.72■■■□□ 2.67
TTC3P53804 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TTC3P53804 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TTC3P53804 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TTC3P53804 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TTC3P53804 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TTC3P53804 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.57■■■□□ 2.65
TTC3P53804 RARRES2P7-201ENST00000567349 469 ntBASIC31.56■■■□□ 2.64
TTC3P53804 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.56■■■□□ 2.64
TTC3P53804 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.56■■■□□ 2.64
TTC3P53804 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TTC3P53804 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
TTC3P53804 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
TTC3P53804 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TTC3P53804 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
TTC3P53804 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
TTC3P53804 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.48■■■□□ 2.63
TTC3P53804 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.47■■■□□ 2.63
TTC3P53804 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.44■■■□□ 2.62
TTC3P53804 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TTC3P53804 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TTC3P53804 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TTC3P53804 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
TTC3P53804 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.36■■■□□ 2.61
TTC3P53804 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TTC3P53804 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.32■■■□□ 2.61
TTC3P53804 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.32■■■□□ 2.6
TTC3P53804 AC136428.2-201ENST00000563187 214 ntBASIC31.32■■■□□ 2.6
TTC3P53804 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.32■■■□□ 2.6
TTC3P53804 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.29■■■□□ 2.6
TTC3P53804 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TTC3P53804 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.27■■■□□ 2.6
TTC3P53804 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TTC3P53804 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.24■■■□□ 2.59
TTC3P53804 AC097358.2-201ENST00000607541 1159 ntBASIC31.24■■■□□ 2.59
TTC3P53804 SETD8P1-201ENST00000623146 1180 ntBASIC31.24■■■□□ 2.59
TTC3P53804 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.23■■■□□ 2.59
TTC3P53804 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TTC3P53804 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TTC3P53804 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.16■■■□□ 2.58
TTC3P53804 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.15■■■□□ 2.58
TTC3P53804 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.15■■■□□ 2.58
TTC3P53804 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TTC3P53804 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.14■■■□□ 2.57
TTC3P53804 SUZ12P1-203ENST00000578195 985 ntBASIC31.14■■■□□ 2.57
TTC3P53804 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TTC3P53804 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TTC3P53804 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.12■■■□□ 2.57
TTC3P53804 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TTC3P53804 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TTC3P53804 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.07■■■□□ 2.56
TTC3P53804 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
TTC3P53804 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TTC3P53804 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.03■■■□□ 2.56
TTC3P53804 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TTC3P53804 AC145285.7-201ENST00000614819 1539 ntBASIC31.02■■■□□ 2.56
TTC3P53804 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TTC3P53804 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.97■■■□□ 2.55
TTC3P53804 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TTC3P53804 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.54
TTC3P53804 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.93■■■□□ 2.54
TTC3P53804 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.92■■■□□ 2.54
TTC3P53804 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.91■■■□□ 2.54
TTC3P53804 RPS2P35-201ENST00000443417 897 ntBASIC30.86■■■□□ 2.53
TTC3P53804 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TTC3P53804 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TTC3P53804 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
TTC3P53804 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TTC3P53804 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
TTC3P53804 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.76■■■□□ 2.51
TTC3P53804 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
TTC3P53804 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
TTC3P53804 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TTC3P53804 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TTC3P53804 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
TTC3P53804 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
TTC3P53804 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TTC3P53804 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TTC3P53804 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TTC3P53804 CAHM-201ENST00000604200 896 ntBASIC30.66■■■□□ 2.5
TTC3P53804 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TTC3P53804 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TTC3P53804 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TTC3P53804 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TTC3P53804 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TTC3P53804 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TTC3P53804 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.63■■■□□ 2.49
TTC3P53804 AL391121.1-201ENST00000607967 1349 ntBASIC30.63■■■□□ 2.49
TTC3P53804 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms