Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDX1P52945 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDX1P52945 AL031258.1-201ENST00000623562 325 ntBASIC28.28■■■□□ 2.12
PDX1P52945 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
PDX1P52945 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDX1P52945 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDX1P52945 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
PDX1P52945 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDX1P52945 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.16■■■□□ 2.1
PDX1P52945 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
PDX1P52945 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PDX1P52945 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.12■■■□□ 2.09
PDX1P52945 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.12■■■□□ 2.09
PDX1P52945 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.12■■■□□ 2.09
PDX1P52945 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDX1P52945 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
PDX1P52945 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PDX1P52945 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PDX1P52945 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.01■■■□□ 2.07
PDX1P52945 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PDX1P52945 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PDX1P52945 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDX1P52945 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.95■■■□□ 2.07
PDX1P52945 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.95■■■□□ 2.06
PDX1P52945 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
PDX1P52945 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PDX1P52945 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.92■■■□□ 2.06
PDX1P52945 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.91■■■□□ 2.06
PDX1P52945 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PDX1P52945 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.86■■■□□ 2.05
PDX1P52945 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.85■■■□□ 2.05
PDX1P52945 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.82■■■□□ 2.04
PDX1P52945 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.81■■■□□ 2.04
PDX1P52945 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDX1P52945 RARRES2P7-201ENST00000567349 469 ntBASIC27.8■■■□□ 2.04
PDX1P52945 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.8■■■□□ 2.04
PDX1P52945 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
PDX1P52945 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.78■■■□□ 2.04
PDX1P52945 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDX1P52945 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PDX1P52945 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.74■■■□□ 2.03
PDX1P52945 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.74■■■□□ 2.03
PDX1P52945 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PDX1P52945 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
PDX1P52945 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.71■■■□□ 2.03
PDX1P52945 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.7■■■□□ 2.02
PDX1P52945 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
PDX1P52945 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
PDX1P52945 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
PDX1P52945 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.65■■■□□ 2.02
PDX1P52945 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.64■■■□□ 2.02
PDX1P52945 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDX1P52945 AC136428.2-201ENST00000563187 214 ntBASIC27.62■■■□□ 2.01
PDX1P52945 AC097358.2-201ENST00000607541 1159 ntBASIC27.6■■■□□ 2.01
PDX1P52945 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.59■■■□□ 2.01
PDX1P52945 SETD8P1-201ENST00000623146 1180 ntBASIC27.57■■■□□ 2
PDX1P52945 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.56■■■□□ 2
PDX1P52945 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PDX1P52945 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.55■■■□□ 2
PDX1P52945 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDX1P52945 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.54■■■□□ 2
PDX1P52945 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PDX1P52945 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.49■■□□□ 1.99
PDX1P52945 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PDX1P52945 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PDX1P52945 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.47■■□□□ 1.99
PDX1P52945 SUZ12P1-203ENST00000578195 985 ntBASIC27.47■■□□□ 1.99
PDX1P52945 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.47■■□□□ 1.99
PDX1P52945 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PDX1P52945 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PDX1P52945 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PDX1P52945 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.44■■□□□ 1.98
PDX1P52945 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.42■■□□□ 1.98
PDX1P52945 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PDX1P52945 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PDX1P52945 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
PDX1P52945 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.39■■□□□ 1.98
PDX1P52945 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PDX1P52945 AC145285.7-201ENST00000614819 1539 ntBASIC27.38■■□□□ 1.97
PDX1P52945 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.36■■□□□ 1.97
PDX1P52945 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PDX1P52945 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PDX1P52945 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PDX1P52945 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.34■■□□□ 1.97
PDX1P52945 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
PDX1P52945 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.31■■□□□ 1.96
PDX1P52945 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.29■■□□□ 1.96
PDX1P52945 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDX1P52945 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDX1P52945 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.26■■□□□ 1.95
PDX1P52945 RPS2P35-201ENST00000443417 897 ntBASIC27.23■■□□□ 1.95
PDX1P52945 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PDX1P52945 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
PDX1P52945 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDX1P52945 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
PDX1P52945 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
PDX1P52945 CAHM-201ENST00000604200 896 ntBASIC27.16■■□□□ 1.94
PDX1P52945 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PDX1P52945 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDX1P52945 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms