Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.34□□□□□ -0.916e-7■■■■■ 62.2
U2AF2P26368 WAC-212ENST00000448193 506 ntTSL 229.52■■■□□ 2.322e-23■■■■■ 61.9
U2AF2P26368 WAC-220ENST00000532233 543 ntTSL 416.4■□□□□ 0.222e-23■■■■■ 61.9
U2AF2P26368 WAC-218ENST00000528491 507 ntTSL 416■□□□□ 0.152e-23■■■■■ 61.9
U2AF2P26368 WAC-217ENST00000526722 585 ntTSL 416■□□□□ 0.152e-23■■■■■ 61.9
U2AF2P26368 WAC-219ENST00000530865 468 ntTSL 24.02□□□□□ -1.772e-23■■■■■ 61.9
U2AF2P26368 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC15.66■□□□□ 0.13e-7■■■■■ 61.6
U2AF2P26368 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC14.41□□□□□ -0.13e-7■■■■■ 61.6
U2AF2P26368 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.173e-7■■■■■ 61.6
U2AF2P26368 BAG6-234ENST00000211379 3779 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.193e-7■■■■■ 61.6
U2AF2P26368 BAG6-237ENST00000375976 3644 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.293e-7■■■■■ 61.6
U2AF2P26368 HSPH1-208ENST00000629751 1034 ntTSL 220.81■□□□□ 0.923e-14■■■■■ 61.5
U2AF2P26368 ALKBH1-204ENST00000557057 1750 ntTSL 320.79■□□□□ 0.921e-14■■■■■ 60.7
U2AF2P26368 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.111e-14■■■■■ 60.7
U2AF2P26368 ALKBH1-203ENST00000555100 649 ntTSL 313.98□□□□□ -0.171e-14■■■■■ 60.7
U2AF2P26368 ALKBH1-202ENST00000554097 497 ntTSL 31.69□□□□□ -2.141e-14■■■■■ 60.7
U2AF2P26368 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.38■■□□□ 1.655e-7■■■■■ 60.3
U2AF2P26368 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.181e-6■■■■■ 59.8
U2AF2P26368 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.49■□□□□ 0.232e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.49■□□□□ 0.232e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC15.91■□□□□ 0.142e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC15.84■□□□□ 0.132e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.132e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-211ENST00000481956 484 ntTSL 314.13□□□□□ -0.152e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.162e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.192e-11■■■■■ 59.6
U2AF2P26368 ATP6V0A1-216ENST00000587882 780 ntTSL 24.32□□□□□ -1.724e-22■■■■■ 59.5
U2AF2P26368 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.14■□□□□ 0.819e-13■■■■■ 58.6
U2AF2P26368 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.729e-13■■■■■ 58.6
U2AF2P26368 TCP11L2-202ENST00000546625 3198 ntTSL 1 (best) BASIC12.73□□□□□ -0.379e-13■■■■■ 58.6
U2AF2P26368 TCP11L2-209ENST00000553098 985 ntTSL 512.56□□□□□ -0.49e-13■■■■■ 58.6
U2AF2P26368 EHBP1-216ENST00000471179 588 ntTSL 219.02■□□□□ 0.647e-21■■■■■ 58.4
U2AF2P26368 PCM1-205ENST00000517836 580 ntTSL 33.33□□□□□ -1.883e-12■■■■■ 58.3
U2AF2P26368 DDX46-211ENST00000513987 543 ntTSL 38.09□□□□□ -1.111e-16■■■■■ 58.2
U2AF2P26368 SLMAP-214ENST00000467901 2698 ntTSL 28.41□□□□□ -1.067e-11■■■■■ 58
U2AF2P26368 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.767e-10■■■■■ 58
U2AF2P26368 SF3B1-208ENST00000470268 2003 ntTSL 25.4□□□□□ -1.552e-11■■■■■ 57.1
U2AF2P26368 SF3B1-210ENST00000482158 772 ntTSL 23.23□□□□□ -1.892e-11■■■■■ 57.1
U2AF2P26368 DDX5-228ENST00000584279 676 ntTSL 322.11■■□□□ 1.134e-11■■■■■ 56.9
U2AF2P26368 DDX5-224ENST00000583239 474 ntTSL 413.03□□□□□ -0.324e-11■■■■■ 56.9
U2AF2P26368 DDX5-231ENST00000585060 572 ntTSL 410.54□□□□□ -0.724e-11■■■■■ 56.9
U2AF2P26368 DDX5-211ENST00000579091 531 ntTSL 47.6□□□□□ -1.194e-11■■■■■ 56.9
U2AF2P26368 DDX5-223ENST00000583212 543 ntTSL 45.79□□□□□ -1.484e-11■■■■■ 56.9
U2AF2P26368 FNBP4-213ENST00000534003 2515 ntTSL 519.73■□□□□ 0.755e-9■■■■■ 56.7
U2AF2P26368 GOLGA4-211ENST00000498250 560 ntTSL 22.73□□□□□ -1.975e-19■■■■■ 55.9
U2AF2P26368 FNBP4-210ENST00000531394 605 ntTSL 312.87□□□□□ -0.353e-8■■■■■ 55.9
U2AF2P26368 FNBP4-204ENST00000525792 840 ntTSL 39.51□□□□□ -0.892e-8■■■■■ 55.9
U2AF2P26368 FNBP4-208ENST00000529156 344 ntTSL 31.78□□□□□ -2.122e-9■■■■■ 55.9
U2AF2P26368 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.896e-13■■■■■ 55.7
U2AF2P26368 QSOX2-202ENST00000455222 851 ntTSL 57.48□□□□□ -1.216e-13■■■■■ 55.7
U2AF2P26368 TOX4-205ENST00000455393 2000 ntTSL 215.85■□□□□ 0.131e-14■■■■■ 54.9
U2AF2P26368 TOX4-203ENST00000448790 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.41e-14■■■■■ 54.9
U2AF2P26368 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.761e-14■■■■■ 54.9
U2AF2P26368 ATXN2L-214ENST00000564284 603 ntTSL 217.42■□□□□ 0.389e-87■■■■■ 54.8
U2AF2P26368 EXOG-202ENST00000412107 1467 ntTSL 1 (best)30.12■■■□□ 2.416e-11■■■■■ 54.8
U2AF2P26368 EXOG-204ENST00000431472 1255 ntTSL 1 (best)25.75■■□□□ 1.716e-11■■■■■ 54.8
U2AF2P26368 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.6■■□□□ 1.536e-11■■■■■ 54.8
U2AF2P26368 EXOG-205ENST00000436414 1679 ntTSL 223.84■■□□□ 1.416e-11■■■■■ 54.8
U2AF2P26368 EXOG-212ENST00000457367 2075 ntTSL 1 (best)23.04■■□□□ 1.286e-11■■■■■ 54.8
U2AF2P26368 EXOG-208ENST00000447573 1750 ntTSL 221.94■■□□□ 1.16e-11■■■■■ 54.8
U2AF2P26368 EXOG-207ENST00000443942 576 ntTSL 421.72■■□□□ 1.076e-11■■■■■ 54.8
U2AF2P26368 EXOG-211ENST00000454803 1548 ntTSL 1 (best)21.53■■□□□ 1.046e-11■■■■■ 54.8
U2AF2P26368 EXOG-206ENST00000438992 1440 ntTSL 220.86■□□□□ 0.936e-11■■■■■ 54.8
U2AF2P26368 EXOG-216ENST00000489813 580 ntTSL 219.82■□□□□ 0.766e-11■■■■■ 54.8
U2AF2P26368 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.576e-11■■■■■ 54.8
U2AF2P26368 EXOG-214ENST00000474071 1799 ntTSL 215.16■□□□□ 0.026e-11■■■■■ 54.8
U2AF2P26368 EXOG-209ENST00000450732 710 ntTSL 314.78□□□□□ -0.046e-11■■■■■ 54.8
U2AF2P26368 EXOG-213ENST00000470291 455 ntTSL 59.88□□□□□ -0.836e-11■■■■■ 54.8
U2AF2P26368 EXOG-210ENST00000453767 576 ntTSL 42.32□□□□□ -2.046e-11■■■■■ 54.8
U2AF2P26368 DDB1-220ENST00000542337 558 ntTSL 322.43■■□□□ 1.185e-14■■■■■ 54.8
U2AF2P26368 DDB1-223ENST00000543658 571 ntTSL 413.57□□□□□ -0.245e-14■■■■■ 54.8
U2AF2P26368 DDB1-222ENST00000543627 540 ntTSL 512.37□□□□□ -0.435e-14■■■■■ 54.8
U2AF2P26368 DDB1-221ENST00000543162 575 ntTSL 412.26□□□□□ -0.455e-14■■■■■ 54.8
U2AF2P26368 DDB1-214ENST00000539426 805 ntTSL 311.93□□□□□ -0.55e-14■■■■■ 54.8
U2AF2P26368 DDB1-206ENST00000535283 1220 ntTSL 211.26□□□□□ -0.615e-14■■■■■ 54.8
U2AF2P26368 DDB1-208ENST00000537120 1215 ntTSL 29.25□□□□□ -0.935e-14■■■■■ 54.8
U2AF2P26368 DDB1-210ENST00000538129 475 ntTSL 26.7□□□□□ -1.345e-14■■■■■ 54.8
U2AF2P26368 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.05■■□□□ 1.67e-12■■■■■ 54.7
U2AF2P26368 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.597e-12■■■■■ 54.7
U2AF2P26368 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC14.99□□□□□ -0.015e-7■■■■■ 54.6
U2AF2P26368 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.135e-7■■■■■ 54.6
U2AF2P26368 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.635e-7■■■■■ 54.6
U2AF2P26368 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC9.44□□□□□ -0.95e-7■■■■■ 54.6
U2AF2P26368 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC9.37□□□□□ -0.915e-7■■■■■ 54.6
U2AF2P26368 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.035e-7■■■■■ 54.6
U2AF2P26368 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.42□□□□□ -1.225e-7■■■■■ 54.6
U2AF2P26368 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.48□□□□□ -1.695e-7■■■■■ 54.6
U2AF2P26368 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.941e-323■■■■■ 54.5
U2AF2P26368 TCP11L2-207ENST00000551802 625 ntTSL 321.83■■□□□ 1.092e-12■■■■■ 53.8
U2AF2P26368 TCP11L2-204ENST00000548428 1067 ntTSL 311.43□□□□□ -0.582e-12■■■■■ 53.8
U2AF2P26368 TCP11L2-206ENST00000551228 544 ntTSL 1 (best)11.09□□□□□ -0.632e-12■■■■■ 53.8
U2AF2P26368 TCP11L2-205ENST00000549906 534 ntTSL 38.09□□□□□ -1.112e-12■■■■■ 53.8
U2AF2P26368 TCP11L2-210ENST00000553143 153 ntTSL 1 (best)7.69□□□□□ -1.182e-12■■■■■ 53.8
U2AF2P26368 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.066e-20■■■■■ 53.3
U2AF2P26368 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.336e-20■■■■■ 53.3
U2AF2P26368 RBMX-212ENST00000568578 4887 ntTSL 1 (best)10.94□□□□□ -0.665e-8■■■■■ 53.1
U2AF2P26368 RBMX-202ENST00000419968 940 ntTSL 510.35□□□□□ -0.755e-8■■■■■ 53.1
U2AF2P26368 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.59□□□□□ -1.355e-8■■■■■ 53.1
U2AF2P26368 PATJ-205ENST00000465798 569 ntTSL 213□□□□□ -0.335e-13■■■■■ 53
U2AF2P26368 PGM3-204ENST00000505470 561 ntTSL 412.96□□□□□ -0.335e-7■■■■■ 52.9
Retrieved 100 of 36,523 protein–RNA pairs in 732.2 ms