RNA–Protein interactions for RNA: ENST00000465798.2

PATJ-205, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 2

Gene PATJ, Length 569 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-205ENST00000465798 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
PATJ-205ENST00000465798 ABCC9O60706 1549 aa24.61■■□□□ 1.53
PATJ-205ENST00000465798 CCDC180Q9P1Z9 1646 aa24.16■■□□□ 1.46
PATJ-205ENST00000465798 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
PATJ-205ENST00000465798 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
PATJ-205ENST00000465798 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
PATJ-205ENST00000465798 NACADO15069 1562 aa22.9■■□□□ 1.26
PATJ-205ENST00000465798 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
PATJ-205ENST00000465798 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
PATJ-205ENST00000465798 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
PATJ-205ENST00000465798 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
PATJ-205ENST00000465798 MYO15BQ96JP2 1530 aa22.32■■□□□ 1.16
PATJ-205ENST00000465798 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
PATJ-205ENST00000465798 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
PATJ-205ENST00000465798 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
PATJ-205ENST00000465798 CECR2Q9BXF3 1484 aa22.18■■□□□ 1.14
PATJ-205ENST00000465798 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
PATJ-205ENST00000465798 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
PATJ-205ENST00000465798 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
PATJ-205ENST00000465798 EIF4G1Q04637 1599 aaKnown RBP22■■□□□ 1.11
PATJ-205ENST00000465798 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
PATJ-205ENST00000465798 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
PATJ-205ENST00000465798 CUX2O14529 1486 aa21.32■■□□□ 1
PATJ-205ENST00000465798 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
PATJ-205ENST00000465798 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
PATJ-205ENST00000465798 SMARCA2P51531 1590 aa20.97■□□□□ 0.95
PATJ-205ENST00000465798 NESP48681 1621 aa20.97■□□□□ 0.95
PATJ-205ENST00000465798 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
PATJ-205ENST00000465798 SMARCA4P51532 1647 aa20.93■□□□□ 0.94
PATJ-205ENST00000465798 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
PATJ-205ENST00000465798 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
PATJ-205ENST00000465798 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
PATJ-205ENST00000465798 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
PATJ-205ENST00000465798 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
PATJ-205ENST00000465798 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
PATJ-205ENST00000465798 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
PATJ-205ENST00000465798 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
PATJ-205ENST00000465798 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
PATJ-205ENST00000465798 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.88
PATJ-205ENST00000465798 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
PATJ-205ENST00000465798 WDR62O43379 1518 aa20.44■□□□□ 0.86
PATJ-205ENST00000465798 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
PATJ-205ENST00000465798 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
PATJ-205ENST00000465798 WIZO95785 1651 aa20.34■□□□□ 0.85
PATJ-205ENST00000465798 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
PATJ-205ENST00000465798 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
PATJ-205ENST00000465798 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
PATJ-205ENST00000465798 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
PATJ-205ENST00000465798 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
PATJ-205ENST00000465798 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
PATJ-205ENST00000465798 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
PATJ-205ENST00000465798 CFTRP13569 1480 aa20.11■□□□□ 0.81
PATJ-205ENST00000465798 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
PATJ-205ENST00000465798 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
PATJ-205ENST00000465798 ARHGEF11O15085 1522 aa19.98■□□□□ 0.79
PATJ-205ENST00000465798 IFT140Q96RY7 1462 aa19.94■□□□□ 0.78
PATJ-205ENST00000465798 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
PATJ-205ENST00000465798 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
PATJ-205ENST00000465798 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
PATJ-205ENST00000465798 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
PATJ-205ENST00000465798 CHD1O14646 1710 aa19.87■□□□□ 0.77
PATJ-205ENST00000465798 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
PATJ-205ENST00000465798 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
PATJ-205ENST00000465798 FBLN2P98095 1184 aa19.81■□□□□ 0.76
PATJ-205ENST00000465798 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
PATJ-205ENST00000465798 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
PATJ-205ENST00000465798 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
PATJ-205ENST00000465798 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
PATJ-205ENST00000465798 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.75
PATJ-205ENST00000465798 TARBP1Q13395 1621 aaKnown RBP19.67■□□□□ 0.74
PATJ-205ENST00000465798 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
PATJ-205ENST00000465798 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
PATJ-205ENST00000465798 SYNJ1O43426 1573 aa19.54■□□□□ 0.72
PATJ-205ENST00000465798 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
PATJ-205ENST00000465798 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
PATJ-205ENST00000465798 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
PATJ-205ENST00000465798 SOGA1O94964 1423 aa19.52■□□□□ 0.72
PATJ-205ENST00000465798 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
PATJ-205ENST00000465798 CLASP1Q7Z460 1538 aa19.49■□□□□ 0.71
PATJ-205ENST00000465798 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
PATJ-205ENST00000465798 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
PATJ-205ENST00000465798 MAGI1Q96QZ7 1491 aaPredicted RBP19.43■□□□□ 0.7
PATJ-205ENST00000465798 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
PATJ-205ENST00000465798 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
PATJ-205ENST00000465798 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
PATJ-205ENST00000465798 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
PATJ-205ENST00000465798 CUX1P39880 1505 aa19.32■□□□□ 0.68
PATJ-205ENST00000465798 WRNQ14191 1432 aaPredicted RBP eCLIP19.3■□□□□ 0.68
PATJ-205ENST00000465798 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
PATJ-205ENST00000465798 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
PATJ-205ENST00000465798 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
PATJ-205ENST00000465798 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
PATJ-205ENST00000465798 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
PATJ-205ENST00000465798 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
PATJ-205ENST00000465798 CEP170Q5SW79 1584 aa19.14■□□□□ 0.65
PATJ-205ENST00000465798 KIF13AQ9H1H9 1805 aa19.11■□□□□ 0.65
PATJ-205ENST00000465798 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
PATJ-205ENST00000465798 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
PATJ-205ENST00000465798 NUP160Q12769 1436 aa19.03■□□□□ 0.64
PATJ-205ENST00000465798 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms