RNA–Protein interactions for RNA: ENST00000535283.5

DDB1-206, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-206ENST00000535283 NISCHQ9Y2I1 1504 aa22.3■■□□□ 1.16
DDB1-206ENST00000535283 ABCC9O60706 1549 aa21.02■□□□□ 0.96
DDB1-206ENST00000535283 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
DDB1-206ENST00000535283 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
DDB1-206ENST00000535283 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
DDB1-206ENST00000535283 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
DDB1-206ENST00000535283 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
DDB1-206ENST00000535283 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
DDB1-206ENST00000535283 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
DDB1-206ENST00000535283 NACADO15069 1562 aa19.32■□□□□ 0.68
DDB1-206ENST00000535283 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
DDB1-206ENST00000535283 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
DDB1-206ENST00000535283 DNAJC5Q9H3Z4 198 aa19.08■□□□□ 0.64
DDB1-206ENST00000535283 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
DDB1-206ENST00000535283 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
DDB1-206ENST00000535283 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
DDB1-206ENST00000535283 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
DDB1-206ENST00000535283 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
DDB1-206ENST00000535283 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
DDB1-206ENST00000535283 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
DDB1-206ENST00000535283 DCAF1Q9Y4B6 1507 aa18.36■□□□□ 0.53
DDB1-206ENST00000535283 CUX2O14529 1486 aa18.3■□□□□ 0.52
DDB1-206ENST00000535283 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
DDB1-206ENST00000535283 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
DDB1-206ENST00000535283 NESP48681 1621 aa17.9■□□□□ 0.46
DDB1-206ENST00000535283 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
DDB1-206ENST00000535283 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
DDB1-206ENST00000535283 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
DDB1-206ENST00000535283 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
DDB1-206ENST00000535283 KIF21AQ7Z4S6 1674 aa17.66■□□□□ 0.42
DDB1-206ENST00000535283 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
DDB1-206ENST00000535283 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
DDB1-206ENST00000535283 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
DDB1-206ENST00000535283 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
DDB1-206ENST00000535283 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
DDB1-206ENST00000535283 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
DDB1-206ENST00000535283 PDS5BQ9NTI5 1447 aa17.44■□□□□ 0.38
DDB1-206ENST00000535283 WDR62O43379 1518 aa17.38■□□□□ 0.37
DDB1-206ENST00000535283 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
DDB1-206ENST00000535283 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
DDB1-206ENST00000535283 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
DDB1-206ENST00000535283 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
DDB1-206ENST00000535283 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
DDB1-206ENST00000535283 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
DDB1-206ENST00000535283 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
DDB1-206ENST00000535283 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
DDB1-206ENST00000535283 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
DDB1-206ENST00000535283 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
DDB1-206ENST00000535283 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
DDB1-206ENST00000535283 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
DDB1-206ENST00000535283 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
DDB1-206ENST00000535283 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
DDB1-206ENST00000535283 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
DDB1-206ENST00000535283 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
DDB1-206ENST00000535283 CYB5RLQ6IPT4 315 aa17.04■□□□□ 0.32
DDB1-206ENST00000535283 WIZO95785 1651 aa17.02■□□□□ 0.32
DDB1-206ENST00000535283 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
DDB1-206ENST00000535283 CFTRP13569 1480 aa16.94■□□□□ 0.3
DDB1-206ENST00000535283 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
DDB1-206ENST00000535283 CHD1O14646 1710 aa16.87■□□□□ 0.29
DDB1-206ENST00000535283 EIF4G3O43432 1585 aaKnown RBP16.84■□□□□ 0.29
DDB1-206ENST00000535283 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
DDB1-206ENST00000535283 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
DDB1-206ENST00000535283 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
DDB1-206ENST00000535283 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
DDB1-206ENST00000535283 AQRO60306 1485 aaKnown RBP eCLIP16.71■□□□□ 0.271e-6■■■■□ 20.5
DDB1-206ENST00000535283 FBLN2P98095 1184 aa16.7■□□□□ 0.26
DDB1-206ENST00000535283 TARBP1Q13395 1621 aaKnown RBP16.66■□□□□ 0.26
DDB1-206ENST00000535283 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
DDB1-206ENST00000535283 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
DDB1-206ENST00000535283 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
DDB1-206ENST00000535283 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
DDB1-206ENST00000535283 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
DDB1-206ENST00000535283 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
DDB1-206ENST00000535283 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
DDB1-206ENST00000535283 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
DDB1-206ENST00000535283 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
DDB1-206ENST00000535283 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
DDB1-206ENST00000535283 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
DDB1-206ENST00000535283 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
DDB1-206ENST00000535283 SOGA1O94964 1423 aa16.39■□□□□ 0.21
DDB1-206ENST00000535283 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
DDB1-206ENST00000535283 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
DDB1-206ENST00000535283 KIF13AQ9H1H9 1805 aa16.37■□□□□ 0.21
DDB1-206ENST00000535283 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
DDB1-206ENST00000535283 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
DDB1-206ENST00000535283 GRIN2BQ13224 1484 aa16.31■□□□□ 0.2
DDB1-206ENST00000535283 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
DDB1-206ENST00000535283 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
DDB1-206ENST00000535283 KDM4FA0A1W2PPD8 638 aa16.26■□□□□ 0.19
DDB1-206ENST00000535283 CUX1P39880 1505 aa16.21■□□□□ 0.19
DDB1-206ENST00000535283 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
DDB1-206ENST00000535283 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
DDB1-206ENST00000535283 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
DDB1-206ENST00000535283 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
DDB1-206ENST00000535283 SHROOM2Q13796 1616 aa16.13■□□□□ 0.17
DDB1-206ENST00000535283 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
DDB1-206ENST00000535283 FAM69CQ0P6D2 419 aa16.11■□□□□ 0.17
DDB1-206ENST00000535283 KDM6BO15054 1643 aa16.11■□□□□ 0.17
DDB1-206ENST00000535283 NUP160Q12769 1436 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms