RNA–Protein interactions for RNA: ENST00000216489.7

ALKBH1-201, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH1, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-201ENST00000216489 NISCHQ9Y2I1 1504 aa29.82■■■□□ 2.36
ALKBH1-201ENST00000216489 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
ALKBH1-201ENST00000216489 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
ALKBH1-201ENST00000216489 SHROOM4Q9ULL8 1493 aa24.88■■□□□ 1.57
ALKBH1-201ENST00000216489 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
ALKBH1-201ENST00000216489 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
ALKBH1-201ENST00000216489 ABCC9O60706 1549 aa24.21■■□□□ 1.47
ALKBH1-201ENST00000216489 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
ALKBH1-201ENST00000216489 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
ALKBH1-201ENST00000216489 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
ALKBH1-201ENST00000216489 NACADO15069 1562 aa23.88■■□□□ 1.41
ALKBH1-201ENST00000216489 RB1CC1Q8TDY2 1594 aa23.62■■□□□ 1.37
ALKBH1-201ENST00000216489 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
ALKBH1-201ENST00000216489 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
ALKBH1-201ENST00000216489 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
ALKBH1-201ENST00000216489 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
ALKBH1-201ENST00000216489 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.3
ALKBH1-201ENST00000216489 WIZO95785 1651 aa23.01■■□□□ 1.27
ALKBH1-201ENST00000216489 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
ALKBH1-201ENST00000216489 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
ALKBH1-201ENST00000216489 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
ALKBH1-201ENST00000216489 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
ALKBH1-201ENST00000216489 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
ALKBH1-201ENST00000216489 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
ALKBH1-201ENST00000216489 TRIM41Q8WV44 630 aa22.51■■□□□ 1.19
ALKBH1-201ENST00000216489 CCDC88BA6NC98 1476 aa22.5■■□□□ 1.19
ALKBH1-201ENST00000216489 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
ALKBH1-201ENST00000216489 PEG3Q9GZU2 1588 aa22.47■■□□□ 1.19
ALKBH1-201ENST00000216489 LOC105371045A0A1W2PR82 267 aa22.42■■□□□ 1.18
ALKBH1-201ENST00000216489 ATAD2BQ9ULI0 1458 aa22.38■■□□□ 1.17
ALKBH1-201ENST00000216489 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
ALKBH1-201ENST00000216489 FAM9AQ8IZU1 332 aaPredicted RBP22.27■■□□□ 1.16
ALKBH1-201ENST00000216489 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
ALKBH1-201ENST00000216489 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
ALKBH1-201ENST00000216489 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
ALKBH1-201ENST00000216489 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
ALKBH1-201ENST00000216489 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
ALKBH1-201ENST00000216489 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
ALKBH1-201ENST00000216489 SOGA1O94964 1423 aa21.89■■□□□ 1.09
ALKBH1-201ENST00000216489 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
ALKBH1-201ENST00000216489 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
ALKBH1-201ENST00000216489 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
ALKBH1-201ENST00000216489 EEA1Q15075 1411 aa21.72■■□□□ 1.07
ALKBH1-201ENST00000216489 CFTRP13569 1480 aa21.71■■□□□ 1.07
ALKBH1-201ENST00000216489 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
ALKBH1-201ENST00000216489 CSRNP3Q8WYN3 585 aa21.68■■□□□ 1.06
ALKBH1-201ENST00000216489 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
ALKBH1-201ENST00000216489 PRDM2Q13029 1718 aa21.61■■□□□ 1.05
ALKBH1-201ENST00000216489 CUX1P39880 1505 aa21.6■■□□□ 1.05
ALKBH1-201ENST00000216489 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
ALKBH1-201ENST00000216489 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
ALKBH1-201ENST00000216489 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
ALKBH1-201ENST00000216489 TNIKQ9UKE5 1360 aa21.53■■□□□ 1.04
ALKBH1-201ENST00000216489 CEP162Q5TB80 1403 aa21.53■■□□□ 1.04
ALKBH1-201ENST00000216489 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
ALKBH1-201ENST00000216489 KIF21BO75037 1637 aa21.5■■□□□ 1.03
ALKBH1-201ENST00000216489 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
ALKBH1-201ENST00000216489 PPARGC1BQ86YN6 1023 aaKnown RBP21.43■■□□□ 1.02
ALKBH1-201ENST00000216489 HRCP23327 699 aa21.41■■□□□ 1.02
ALKBH1-201ENST00000216489 RAPGEF2Q9Y4G8 1499 aa21.4■■□□□ 1.02
ALKBH1-201ENST00000216489 NESP48681 1621 aa21.4■■□□□ 1.02
ALKBH1-201ENST00000216489 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
ALKBH1-201ENST00000216489 DNAJC5BQ9UF47 199 aa21.34■■□□□ 1.01
ALKBH1-201ENST00000216489 KIF27Q86VH2 1401 aa21.32■■□□□ 1
ALKBH1-201ENST00000216489 FGD5Q6ZNL6 1462 aa21.3■■□□□ 1
ALKBH1-201ENST00000216489 PRXQ9BXM0 1461 aa21.28■■□□□ 1
ALKBH1-201ENST00000216489 CLIP1P30622 1438 aa21.25■□□□□ 0.99
ALKBH1-201ENST00000216489 CUX2O14529 1486 aa21.25■□□□□ 0.99
ALKBH1-201ENST00000216489 ERICH3Q5RHP9 1530 aa21.25■□□□□ 0.99
ALKBH1-201ENST00000216489 LAMC3Q9Y6N6 1575 aa21.24■□□□□ 0.99
ALKBH1-201ENST00000216489 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
ALKBH1-201ENST00000216489 TTBK1Q5TCY1 1321 aaPredicted RBP21.22■□□□□ 0.99
ALKBH1-201ENST00000216489 DNMBPQ6XZF7 1577 aa21.22■□□□□ 0.99
ALKBH1-201ENST00000216489 TOPBP1Q92547 1522 aa21.18■□□□□ 0.98
ALKBH1-201ENST00000216489 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
ALKBH1-201ENST00000216489 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
ALKBH1-201ENST00000216489 IGF1RP08069 1367 aa21.12■□□□□ 0.97
ALKBH1-201ENST00000216489 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
ALKBH1-201ENST00000216489 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
ALKBH1-201ENST00000216489 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
ALKBH1-201ENST00000216489 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.96
ALKBH1-201ENST00000216489 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
ALKBH1-201ENST00000216489 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
ALKBH1-201ENST00000216489 ARAP1Q96P48 1450 aa21.02■□□□□ 0.95
ALKBH1-201ENST00000216489 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
ALKBH1-201ENST00000216489 ARHGAP35Q9NRY4 1499 aa20.92■□□□□ 0.94
ALKBH1-201ENST00000216489 APLP2Q06481 763 aa20.9■□□□□ 0.94
ALKBH1-201ENST00000216489 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
ALKBH1-201ENST00000216489 ABCA5Q8WWZ7 1642 aa20.87■□□□□ 0.93
ALKBH1-201ENST00000216489 CUL7Q14999 1698 aa20.87■□□□□ 0.93
ALKBH1-201ENST00000216489 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
ALKBH1-201ENST00000216489 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
ALKBH1-201ENST00000216489 GAPVD1Q14C86 1478 aa20.82■□□□□ 0.92
ALKBH1-201ENST00000216489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
ALKBH1-201ENST00000216489 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
ALKBH1-201ENST00000216489 CTTNBP2Q8WZ74 1663 aa20.75■□□□□ 0.91
ALKBH1-201ENST00000216489 KANK4Q5T7N3 995 aaPredicted RBP20.74■□□□□ 0.91
ALKBH1-201ENST00000216489 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
ALKBH1-201ENST00000216489 CCER1Q8TC90 406 aaPredicted RBP20.72■□□□□ 0.91
ALKBH1-201ENST00000216489 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms