RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
CNOT4-207ENST00000451834 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
CNOT4-207ENST00000451834 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
CNOT4-207ENST00000451834 NACADO15069 1562 aa17.66■□□□□ 0.42
CNOT4-207ENST00000451834 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
CNOT4-207ENST00000451834 RB1CC1Q8TDY2 1594 aa17.58■□□□□ 0.41
CNOT4-207ENST00000451834 ABCC9O60706 1549 aa17.56■□□□□ 0.4
CNOT4-207ENST00000451834 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
CNOT4-207ENST00000451834 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
CNOT4-207ENST00000451834 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
CNOT4-207ENST00000451834 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
CNOT4-207ENST00000451834 EIF4G1Q04637 1599 aaKnown RBP16.52■□□□□ 0.23
CNOT4-207ENST00000451834 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
CNOT4-207ENST00000451834 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
CNOT4-207ENST00000451834 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
CNOT4-207ENST00000451834 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
CNOT4-207ENST00000451834 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
CNOT4-207ENST00000451834 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
CNOT4-207ENST00000451834 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
CNOT4-207ENST00000451834 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
CNOT4-207ENST00000451834 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
CNOT4-207ENST00000451834 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
CNOT4-207ENST00000451834 PRDM2Q13029 1718 aa16■□□□□ 0.15
CNOT4-207ENST00000451834 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
CNOT4-207ENST00000451834 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
CNOT4-207ENST00000451834 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
CNOT4-207ENST00000451834 CUX2O14529 1486 aa15.85■□□□□ 0.13
CNOT4-207ENST00000451834 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
CNOT4-207ENST00000451834 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
CNOT4-207ENST00000451834 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
CNOT4-207ENST00000451834 KIF21AQ7Z4S6 1674 aa15.61■□□□□ 0.09
CNOT4-207ENST00000451834 WDR62O43379 1518 aa15.6■□□□□ 0.09
CNOT4-207ENST00000451834 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
CNOT4-207ENST00000451834 WIZO95785 1651 aa15.52■□□□□ 0.08
CNOT4-207ENST00000451834 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
CNOT4-207ENST00000451834 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
CNOT4-207ENST00000451834 CFTRP13569 1480 aa15.42■□□□□ 0.06
CNOT4-207ENST00000451834 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
CNOT4-207ENST00000451834 MRC2Q9UBG0 1479 aa15.34■□□□□ 0.05
CNOT4-207ENST00000451834 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
CNOT4-207ENST00000451834 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
CNOT4-207ENST00000451834 NESP48681 1621 aa15.25■□□□□ 0.03
CNOT4-207ENST00000451834 ABCC8Q09428 1581 aa15.21■□□□□ 0.03
CNOT4-207ENST00000451834 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
CNOT4-207ENST00000451834 DNMBPQ6XZF7 1577 aa15.16■□□□□ 0.02
CNOT4-207ENST00000451834 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
CNOT4-207ENST00000451834 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
CNOT4-207ENST00000451834 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
CNOT4-207ENST00000451834 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
CNOT4-207ENST00000451834 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
CNOT4-207ENST00000451834 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
CNOT4-207ENST00000451834 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
CNOT4-207ENST00000451834 IFT140Q96RY7 1462 aa15.02■□□□□ -0
CNOT4-207ENST00000451834 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
CNOT4-207ENST00000451834 EIF4G3O43432 1585 aaKnown RBP14.97□□□□□ -0.01
CNOT4-207ENST00000451834 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
CNOT4-207ENST00000451834 PBRM1Q86U86 1689 aa14.94□□□□□ -0.02
CNOT4-207ENST00000451834 CLASP1Q7Z460 1538 aa14.88□□□□□ -0.03
CNOT4-207ENST00000451834 CHD1O14646 1710 aa14.88□□□□□ -0.03
CNOT4-207ENST00000451834 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
CNOT4-207ENST00000451834 SHROOM2Q13796 1616 aa14.83□□□□□ -0.04
CNOT4-207ENST00000451834 CUX1P39880 1505 aa14.79□□□□□ -0.04
CNOT4-207ENST00000451834 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.04
CNOT4-207ENST00000451834 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
CNOT4-207ENST00000451834 MAGI1Q96QZ7 1491 aaPredicted RBP14.76□□□□□ -0.05
CNOT4-207ENST00000451834 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
CNOT4-207ENST00000451834 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
CNOT4-207ENST00000451834 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
CNOT4-207ENST00000451834 ADAMTS12P58397 1594 aa14.7□□□□□ -0.06
CNOT4-207ENST00000451834 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
CNOT4-207ENST00000451834 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
CNOT4-207ENST00000451834 ZNF608Q9ULD9 1512 aaPredicted RBP14.62□□□□□ -0.07
CNOT4-207ENST00000451834 CUL7Q14999 1698 aa14.62□□□□□ -0.07
CNOT4-207ENST00000451834 FGD5Q6ZNL6 1462 aa14.62□□□□□ -0.07
CNOT4-207ENST00000451834 GRIN2BQ13224 1484 aa14.58□□□□□ -0.08
CNOT4-207ENST00000451834 SYNJ2O15056 1496 aa14.58□□□□□ -0.08
CNOT4-207ENST00000451834 ARHGEF11O15085 1522 aa14.55□□□□□ -0.08
CNOT4-207ENST00000451834 NUP160Q12769 1436 aa14.54□□□□□ -0.08
CNOT4-207ENST00000451834 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
CNOT4-207ENST00000451834 CEP170Q5SW79 1584 aa14.47□□□□□ -0.09
CNOT4-207ENST00000451834 SNAPC4Q5SXM2 1469 aa14.45□□□□□ -0.1
CNOT4-207ENST00000451834 SOGA1O94964 1423 aa14.45□□□□□ -0.1
CNOT4-207ENST00000451834 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
CNOT4-207ENST00000451834 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
CNOT4-207ENST00000451834 GRIN2AQ12879 1464 aa14.41□□□□□ -0.1
CNOT4-207ENST00000451834 RAD54L2Q9Y4B4 1467 aa14.39□□□□□ -0.11
CNOT4-207ENST00000451834 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
CNOT4-207ENST00000451834 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
CNOT4-207ENST00000451834 KIF13AQ9H1H9 1805 aa14.35□□□□□ -0.11
CNOT4-207ENST00000451834 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.112e-7■■■■□ 23.2
CNOT4-207ENST00000451834 CTTNBP2Q8WZ74 1663 aa14.33□□□□□ -0.12
CNOT4-207ENST00000451834 MAPKBP1O60336 1514 aa14.32□□□□□ -0.12
CNOT4-207ENST00000451834 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
CNOT4-207ENST00000451834 GLI2P10070 1586 aa14.25□□□□□ -0.13
CNOT4-207ENST00000451834 UHRF1BP1LA0JNW5 1464 aa14.23□□□□□ -0.13
CNOT4-207ENST00000451834 UGGT2Q9NYU1 1516 aa14.22□□□□□ -0.13
CNOT4-207ENST00000451834 KIAA0586Q9BVV6 1533 aa14.18□□□□□ -0.14
CNOT4-207ENST00000451834 ADCY10Q96PN6 1610 aa14.18□□□□□ -0.14
CNOT4-207ENST00000451834 PPRC1Q5VV67 1664 aaKnown RBP14.16□□□□□ -0.14
CNOT4-207ENST00000451834 ERCC6L2Q5T890 1561 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms