RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
CNOT4-204ENST00000414802 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
CNOT4-204ENST00000414802 ABCC9O60706 1549 aa26.42■■□□□ 1.82
CNOT4-204ENST00000414802 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
CNOT4-204ENST00000414802 DCAF8L2P0C7V8 631 aa25.75■■□□□ 1.71
CNOT4-204ENST00000414802 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
CNOT4-204ENST00000414802 NACADO15069 1562 aa25.64■■□□□ 1.7
CNOT4-204ENST00000414802 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
CNOT4-204ENST00000414802 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.69
CNOT4-204ENST00000414802 UNC13AQ9UPW8 1703 aa25.22■■□□□ 1.63
CNOT4-204ENST00000414802 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
CNOT4-204ENST00000414802 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
CNOT4-204ENST00000414802 BICRAQ9NZM4 1560 aa24.85■■□□□ 1.57
CNOT4-204ENST00000414802 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
CNOT4-204ENST00000414802 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
CNOT4-204ENST00000414802 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
CNOT4-204ENST00000414802 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
CNOT4-204ENST00000414802 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
CNOT4-204ENST00000414802 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
CNOT4-204ENST00000414802 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
CNOT4-204ENST00000414802 WIZO95785 1651 aa23.85■■□□□ 1.41
CNOT4-204ENST00000414802 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
CNOT4-204ENST00000414802 PEG3Q9GZU2 1588 aa23.77■■□□□ 1.4
CNOT4-204ENST00000414802 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
CNOT4-204ENST00000414802 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
CNOT4-204ENST00000414802 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
CNOT4-204ENST00000414802 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.38
CNOT4-204ENST00000414802 HMGXB3Q12766 1538 aa23.61■■□□□ 1.37
CNOT4-204ENST00000414802 BAZ1BQ9UIG0 1483 aaKnown RBP23.61■■□□□ 1.37
CNOT4-204ENST00000414802 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
CNOT4-204ENST00000414802 TOP2AP11388 1531 aaKnown RBP23.55■■□□□ 1.36
CNOT4-204ENST00000414802 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
CNOT4-204ENST00000414802 NESP48681 1621 aa23.03■■□□□ 1.28
CNOT4-204ENST00000414802 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
CNOT4-204ENST00000414802 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
CNOT4-204ENST00000414802 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
CNOT4-204ENST00000414802 CFTRP13569 1480 aa22.94■■□□□ 1.26
CNOT4-204ENST00000414802 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
CNOT4-204ENST00000414802 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
CNOT4-204ENST00000414802 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
CNOT4-204ENST00000414802 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
CNOT4-204ENST00000414802 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
CNOT4-204ENST00000414802 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
CNOT4-204ENST00000414802 ABCC8Q09428 1581 aa22.64■■□□□ 1.21
CNOT4-204ENST00000414802 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
CNOT4-204ENST00000414802 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
CNOT4-204ENST00000414802 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
CNOT4-204ENST00000414802 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
CNOT4-204ENST00000414802 CUX1P39880 1505 aa22.5■■□□□ 1.19
CNOT4-204ENST00000414802 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
CNOT4-204ENST00000414802 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
CNOT4-204ENST00000414802 WDR62O43379 1518 aa22.47■■□□□ 1.19
CNOT4-204ENST00000414802 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
CNOT4-204ENST00000414802 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
CNOT4-204ENST00000414802 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
CNOT4-204ENST00000414802 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.17
CNOT4-204ENST00000414802 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
CNOT4-204ENST00000414802 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
CNOT4-204ENST00000414802 CUX2O14529 1486 aa22.25■■□□□ 1.15
CNOT4-204ENST00000414802 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
CNOT4-204ENST00000414802 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
CNOT4-204ENST00000414802 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
CNOT4-204ENST00000414802 TARBP1Q13395 1621 aaKnown RBP22.21■■□□□ 1.15
CNOT4-204ENST00000414802 SOGA1O94964 1423 aa22.16■■□□□ 1.14
CNOT4-204ENST00000414802 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
CNOT4-204ENST00000414802 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
CNOT4-204ENST00000414802 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.13
CNOT4-204ENST00000414802 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
CNOT4-204ENST00000414802 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
CNOT4-204ENST00000414802 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
CNOT4-204ENST00000414802 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
CNOT4-204ENST00000414802 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
CNOT4-204ENST00000414802 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.112e-7■■■■□ 23.2
CNOT4-204ENST00000414802 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
CNOT4-204ENST00000414802 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
CNOT4-204ENST00000414802 FAM9AQ8IZU1 332 aaPredicted RBP21.86■■□□□ 1.09
CNOT4-204ENST00000414802 GRIN2BQ13224 1484 aa21.86■■□□□ 1.09
CNOT4-204ENST00000414802 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
CNOT4-204ENST00000414802 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
CNOT4-204ENST00000414802 EEA1Q15075 1411 aa21.81■■□□□ 1.08
CNOT4-204ENST00000414802 ADAMTS12P58397 1594 aa21.81■■□□□ 1.08
CNOT4-204ENST00000414802 CUL7Q14999 1698 aa21.8■■□□□ 1.08
CNOT4-204ENST00000414802 IGF1RP08069 1367 aa21.78■■□□□ 1.08
CNOT4-204ENST00000414802 CHD1O14646 1710 aa21.77■■□□□ 1.08
CNOT4-204ENST00000414802 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
CNOT4-204ENST00000414802 CSRNP3Q8WYN3 585 aa21.7■■□□□ 1.06
CNOT4-204ENST00000414802 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
CNOT4-204ENST00000414802 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
CNOT4-204ENST00000414802 KIF21BO75037 1637 aa21.67■■□□□ 1.06
CNOT4-204ENST00000414802 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
CNOT4-204ENST00000414802 PRXQ9BXM0 1461 aa21.65■■□□□ 1.06
CNOT4-204ENST00000414802 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
CNOT4-204ENST00000414802 EHMT2Q96KQ7 1210 aa21.61■■□□□ 1.05
CNOT4-204ENST00000414802 GRIN2AQ12879 1464 aa21.61■■□□□ 1.05
CNOT4-204ENST00000414802 FBLN2P98095 1184 aa21.6■■□□□ 1.05
CNOT4-204ENST00000414802 CHMP7Q8WUX9 453 aaPredicted RBP21.57■■□□□ 1.04
CNOT4-204ENST00000414802 CTTNBP2Q8WZ74 1663 aa21.55■■□□□ 1.04
CNOT4-204ENST00000414802 CEP170Q5SW79 1584 aa21.55■■□□□ 1.04
CNOT4-204ENST00000414802 GOLGA3Q08378 1498 aa21.54■■□□□ 1.04
CNOT4-204ENST00000414802 NUP160Q12769 1436 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms