RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
DDB1-222ENST00000543627 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
DDB1-222ENST00000543627 ABCC9O60706 1549 aa23.31■■□□□ 1.32
DDB1-222ENST00000543627 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
DDB1-222ENST00000543627 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
DDB1-222ENST00000543627 NACADO15069 1562 aa22.18■■□□□ 1.14
DDB1-222ENST00000543627 ZCCHC6Q5VYS8 1495 aaKnown RBP22.06■■□□□ 1.12
DDB1-222ENST00000543627 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
DDB1-222ENST00000543627 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
DDB1-222ENST00000543627 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
DDB1-222ENST00000543627 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
DDB1-222ENST00000543627 SCRIBQ14160 1630 aa21.65■■□□□ 1.06
DDB1-222ENST00000543627 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
DDB1-222ENST00000543627 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
DDB1-222ENST00000543627 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
DDB1-222ENST00000543627 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.96
DDB1-222ENST00000543627 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
DDB1-222ENST00000543627 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
DDB1-222ENST00000543627 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
DDB1-222ENST00000543627 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
DDB1-222ENST00000543627 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
DDB1-222ENST00000543627 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
DDB1-222ENST00000543627 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
DDB1-222ENST00000543627 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
DDB1-222ENST00000543627 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
DDB1-222ENST00000543627 HMGXB3Q12766 1538 aa20.33■□□□□ 0.85
DDB1-222ENST00000543627 WIZO95785 1651 aa20.3■□□□□ 0.84
DDB1-222ENST00000543627 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
DDB1-222ENST00000543627 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
DDB1-222ENST00000543627 NESP48681 1621 aa20.13■□□□□ 0.81
DDB1-222ENST00000543627 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
DDB1-222ENST00000543627 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.79
DDB1-222ENST00000543627 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
DDB1-222ENST00000543627 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.79
DDB1-222ENST00000543627 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
DDB1-222ENST00000543627 DNAJC5Q9H3Z4 198 aa19.9■□□□□ 0.78
DDB1-222ENST00000543627 PDS5BQ9NTI5 1447 aa19.9■□□□□ 0.78
DDB1-222ENST00000543627 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
DDB1-222ENST00000543627 KIF21AQ7Z4S6 1674 aa19.81■□□□□ 0.76
DDB1-222ENST00000543627 CFTRP13569 1480 aa19.77■□□□□ 0.76
DDB1-222ENST00000543627 CUX2O14529 1486 aa19.75■□□□□ 0.75
DDB1-222ENST00000543627 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
DDB1-222ENST00000543627 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
DDB1-222ENST00000543627 THOC2Q8NI27 1593 aaKnown RBP19.69■□□□□ 0.74
DDB1-222ENST00000543627 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
DDB1-222ENST00000543627 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
DDB1-222ENST00000543627 WDR62O43379 1518 aa19.54■□□□□ 0.72
DDB1-222ENST00000543627 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
DDB1-222ENST00000543627 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
DDB1-222ENST00000543627 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
DDB1-222ENST00000543627 DNMBPQ6XZF7 1577 aa19.33■□□□□ 0.69
DDB1-222ENST00000543627 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
DDB1-222ENST00000543627 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
DDB1-222ENST00000543627 SOGA1O94964 1423 aa19.23■□□□□ 0.67
DDB1-222ENST00000543627 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
DDB1-222ENST00000543627 CUX1P39880 1505 aa19.22■□□□□ 0.67
DDB1-222ENST00000543627 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
DDB1-222ENST00000543627 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
DDB1-222ENST00000543627 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.669e-7■■■□□ 14.7
DDB1-222ENST00000543627 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
DDB1-222ENST00000543627 FBLN2P98095 1184 aa19.13■□□□□ 0.65
DDB1-222ENST00000543627 WRNQ14191 1432 aaPredicted RBP eCLIP19.13■□□□□ 0.65
DDB1-222ENST00000543627 TARBP1Q13395 1621 aaKnown RBP19.12■□□□□ 0.65
DDB1-222ENST00000543627 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
DDB1-222ENST00000543627 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
DDB1-222ENST00000543627 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
DDB1-222ENST00000543627 TOP2BQ02880 1626 aa19■□□□□ 0.63
DDB1-222ENST00000543627 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
DDB1-222ENST00000543627 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
DDB1-222ENST00000543627 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
DDB1-222ENST00000543627 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
DDB1-222ENST00000543627 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
DDB1-222ENST00000543627 GRIN2BQ13224 1484 aa18.94■□□□□ 0.62
DDB1-222ENST00000543627 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
DDB1-222ENST00000543627 CHD1O14646 1710 aa18.88■□□□□ 0.61
DDB1-222ENST00000543627 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
DDB1-222ENST00000543627 PBRM1Q86U86 1689 aa18.86■□□□□ 0.61
DDB1-222ENST00000543627 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
DDB1-222ENST00000543627 ABCA5Q8WWZ7 1642 aa18.84■□□□□ 0.61
DDB1-222ENST00000543627 SYNJ2O15056 1496 aa18.8■□□□□ 0.6
DDB1-222ENST00000543627 KIF27Q86VH2 1401 aa18.74■□□□□ 0.59
DDB1-222ENST00000543627 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
DDB1-222ENST00000543627 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
DDB1-222ENST00000543627 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
DDB1-222ENST00000543627 ADAMTS12P58397 1594 aa18.69■□□□□ 0.58
DDB1-222ENST00000543627 GRIN2AQ12879 1464 aa18.69■□□□□ 0.58
DDB1-222ENST00000543627 RIMBP3CA6NJZ7 1639 aa18.68■□□□□ 0.58
DDB1-222ENST00000543627 RIMBP3BA6NNM3 1639 aa18.68■□□□□ 0.58
DDB1-222ENST00000543627 RIMBP3Q9UFD9 1639 aa18.68■□□□□ 0.58
DDB1-222ENST00000543627 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
DDB1-222ENST00000543627 IGF1RP08069 1367 aa18.67■□□□□ 0.58
DDB1-222ENST00000543627 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
DDB1-222ENST00000543627 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
DDB1-222ENST00000543627 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
DDB1-222ENST00000543627 CEP170Q5SW79 1584 aa18.58■□□□□ 0.56
DDB1-222ENST00000543627 NUP160Q12769 1436 aa18.56■□□□□ 0.56
DDB1-222ENST00000543627 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
DDB1-222ENST00000543627 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
DDB1-222ENST00000543627 CUL7Q14999 1698 aa18.53■□□□□ 0.56
DDB1-222ENST00000543627 ARAP1Q96P48 1450 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms