RNA–Protein interactions for RNA: ENST00000420843.6

ARRB1-202, Transcript of arrestin beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ARRB1, Length 3,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRB1-202ENST00000420843 NISCHQ9Y2I1 1504 aa28■■■□□ 2.07
ARRB1-202ENST00000420843 DCAF8L2P0C7V8 631 aa24.44■■□□□ 1.5
ARRB1-202ENST00000420843 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
ARRB1-202ENST00000420843 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
ARRB1-202ENST00000420843 HRCP23327 699 aa23.98■■□□□ 1.43
ARRB1-202ENST00000420843 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
ARRB1-202ENST00000420843 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
ARRB1-202ENST00000420843 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
ARRB1-202ENST00000420843 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.38
ARRB1-202ENST00000420843 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
ARRB1-202ENST00000420843 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
ARRB1-202ENST00000420843 ABCC9O60706 1549 aa23.27■■□□□ 1.32
ARRB1-202ENST00000420843 LOC105371045A0A1W2PR82 267 aa23.12■■□□□ 1.29
ARRB1-202ENST00000420843 DCAF1Q9Y4B6 1507 aa23.11■■□□□ 1.29
ARRB1-202ENST00000420843 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
ARRB1-202ENST00000420843 SCRIBQ14160 1630 aa22.72■■□□□ 1.23
ARRB1-202ENST00000420843 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
ARRB1-202ENST00000420843 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
ARRB1-202ENST00000420843 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
ARRB1-202ENST00000420843 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.18
ARRB1-202ENST00000420843 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
ARRB1-202ENST00000420843 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
ARRB1-202ENST00000420843 NACADO15069 1562 aa22.24■■□□□ 1.15
ARRB1-202ENST00000420843 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
ARRB1-202ENST00000420843 CECR2Q9BXF3 1484 aa22.16■■□□□ 1.14
ARRB1-202ENST00000420843 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
ARRB1-202ENST00000420843 RB1CC1Q8TDY2 1594 aa22.11■■□□□ 1.13
ARRB1-202ENST00000420843 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
ARRB1-202ENST00000420843 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
ARRB1-202ENST00000420843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
ARRB1-202ENST00000420843 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
ARRB1-202ENST00000420843 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
ARRB1-202ENST00000420843 GTF3C3Q9Y5Q9 886 aa21.9■■□□□ 1.1
ARRB1-202ENST00000420843 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.09
ARRB1-202ENST00000420843 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
ARRB1-202ENST00000420843 WIZO95785 1651 aa21.74■■□□□ 1.07
ARRB1-202ENST00000420843 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
ARRB1-202ENST00000420843 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
ARRB1-202ENST00000420843 MYT1Q01538 1121 aa21.61■■□□□ 1.05
ARRB1-202ENST00000420843 BAZ1AQ9NRL2 1556 aaPredicted RBP21.52■■□□□ 1.04
ARRB1-202ENST00000420843 BICRAQ9NZM4 1560 aa21.52■■□□□ 1.03
ARRB1-202ENST00000420843 YTHDC1Q96MU7 727 aaKnown RBP21.49■■□□□ 1.03
ARRB1-202ENST00000420843 ZNF316A6NFI3 1004 aaPredicted RBP21.46■■□□□ 1.03
ARRB1-202ENST00000420843 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.021e-6■■■■■ 58.5
ARRB1-202ENST00000420843 SMARCA4P51532 1647 aa21.41■■□□□ 1.02
ARRB1-202ENST00000420843 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
ARRB1-202ENST00000420843 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
ARRB1-202ENST00000420843 MIER1Q8N108 512 aa21.34■■□□□ 1.01
ARRB1-202ENST00000420843 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
ARRB1-202ENST00000420843 ABCC8Q09428 1581 aa21.31■■□□□ 1
ARRB1-202ENST00000420843 SOGA1O94964 1423 aa21.24■□□□□ 0.99
ARRB1-202ENST00000420843 TNIKQ9UKE5 1360 aa21.22■□□□□ 0.99
ARRB1-202ENST00000420843 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
ARRB1-202ENST00000420843 UBTFP17480 764 aaKnown RBP21.18■□□□□ 0.98
ARRB1-202ENST00000420843 HNRNPUL2Q1KMD3 747 aaKnown RBP21.16■□□□□ 0.98
ARRB1-202ENST00000420843 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.97
ARRB1-202ENST00000420843 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
ARRB1-202ENST00000420843 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
ARRB1-202ENST00000420843 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
ARRB1-202ENST00000420843 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
ARRB1-202ENST00000420843 RANGAP1P46060 587 aaPredicted RBP21.11■□□□□ 0.97
ARRB1-202ENST00000420843 EEA1Q15075 1411 aa20.98■□□□□ 0.95
ARRB1-202ENST00000420843 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
ARRB1-202ENST00000420843 SUPT16HQ9Y5B9 1047 aaKnown RBP20.9■□□□□ 0.94
ARRB1-202ENST00000420843 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
ARRB1-202ENST00000420843 CLIP1P30622 1438 aa20.83■□□□□ 0.92
ARRB1-202ENST00000420843 VPS8Q8N3P4 1428 aa20.78■□□□□ 0.92
ARRB1-202ENST00000420843 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
ARRB1-202ENST00000420843 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
ARRB1-202ENST00000420843 APLP2Q06481 763 aa20.76■□□□□ 0.91
ARRB1-202ENST00000420843 TSHZ2Q9NRE2 1034 aa20.75■□□□□ 0.91
ARRB1-202ENST00000420843 CLSPNQ9HAW4 1339 aa20.73■□□□□ 0.91
ARRB1-202ENST00000420843 KIF21BO75037 1637 aa20.71■□□□□ 0.91
ARRB1-202ENST00000420843 DHX57Q6P158 1386 aaKnown RBP20.7■□□□□ 0.91
ARRB1-202ENST00000420843 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
ARRB1-202ENST00000420843 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
ARRB1-202ENST00000420843 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
ARRB1-202ENST00000420843 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
ARRB1-202ENST00000420843 ANP32EQ9BTT0 268 aa20.63■□□□□ 0.89
ARRB1-202ENST00000420843 KCNH8Q96L42 1107 aa20.6■□□□□ 0.89
ARRB1-202ENST00000420843 KANK4Q5T7N3 995 aaPredicted RBP20.53■□□□□ 0.88
ARRB1-202ENST00000420843 BCANQ96GW7 911 aa20.52■□□□□ 0.87
ARRB1-202ENST00000420843 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
ARRB1-202ENST00000420843 NESP48681 1621 aa20.49■□□□□ 0.87
ARRB1-202ENST00000420843 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
ARRB1-202ENST00000420843 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
ARRB1-202ENST00000420843 CFTRP13569 1480 aa20.41■□□□□ 0.86
ARRB1-202ENST00000420843 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
ARRB1-202ENST00000420843 FKBP8Q14318 412 aa20.4■□□□□ 0.86
ARRB1-202ENST00000420843 ITGAEP38570 1179 aa20.39■□□□□ 0.85
ARRB1-202ENST00000420843 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
ARRB1-202ENST00000420843 CUX1P39880 1505 aa20.37■□□□□ 0.85
ARRB1-202ENST00000420843 CUX2O14529 1486 aa20.32■□□□□ 0.84
ARRB1-202ENST00000420843 P3H3Q8IVL6 736 aa20.32■□□□□ 0.84
ARRB1-202ENST00000420843 DDX10Q13206 875 aaKnown RBP20.31■□□□□ 0.84
ARRB1-202ENST00000420843 CCNB3Q8WWL7 1395 aa20.3■□□□□ 0.84
ARRB1-202ENST00000420843 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
ARRB1-202ENST00000420843 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
ARRB1-202ENST00000420843 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
ARRB1-202ENST00000420843 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms