RNA–Protein interactions for RNA: ENST00000498250.1

GOLGA4-211, Transcript of golgin A4, humanhuman

TSL 2

Gene GOLGA4, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA4-211ENST00000498250 AEBP2Q6ZN18 517 aaPredicted RBP26.08■■□□□ 1.77
GOLGA4-211ENST00000498250 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
GOLGA4-211ENST00000498250 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
GOLGA4-211ENST00000498250 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
GOLGA4-211ENST00000498250 FOXD1Q16676 465 aa20.84■□□□□ 0.93
GOLGA4-211ENST00000498250 MSH5O43196 834 aa19.68■□□□□ 0.74
GOLGA4-211ENST00000498250 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
GOLGA4-211ENST00000498250 PIAS4Q8N2W9 510 aaPredicted RBP19.5■□□□□ 0.71
GOLGA4-211ENST00000498250 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
GOLGA4-211ENST00000498250 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
GOLGA4-211ENST00000498250 ADRA2BP18089 450 aa19.28■□□□□ 0.68
GOLGA4-211ENST00000498250 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
GOLGA4-211ENST00000498250 MAPK8IP2Q13387 824 aaPredicted RBP17.75■□□□□ 0.43
GOLGA4-211ENST00000498250 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
GOLGA4-211ENST00000498250 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
GOLGA4-211ENST00000498250 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
GOLGA4-211ENST00000498250 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
GOLGA4-211ENST00000498250 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
GOLGA4-211ENST00000498250 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
GOLGA4-211ENST00000498250 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
GOLGA4-211ENST00000498250 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
GOLGA4-211ENST00000498250 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
GOLGA4-211ENST00000498250 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
GOLGA4-211ENST00000498250 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
GOLGA4-211ENST00000498250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.23e-8■■■■■ 27.6
GOLGA4-211ENST00000498250 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
GOLGA4-211ENST00000498250 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
GOLGA4-211ENST00000498250 CAPN15O75808 1086 aa15.72■□□□□ 0.11
GOLGA4-211ENST00000498250 KCNA4P22459 653 aa15.7■□□□□ 0.1
GOLGA4-211ENST00000498250 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
GOLGA4-211ENST00000498250 DSG3P32926 999 aa15.57■□□□□ 0.08
GOLGA4-211ENST00000498250 APLP2Q06481 763 aa15.51■□□□□ 0.07
GOLGA4-211ENST00000498250 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
GOLGA4-211ENST00000498250 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
GOLGA4-211ENST00000498250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
GOLGA4-211ENST00000498250 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
GOLGA4-211ENST00000498250 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
GOLGA4-211ENST00000498250 ABCB7O75027 752 aa15.29■□□□□ 0.04
GOLGA4-211ENST00000498250 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
GOLGA4-211ENST00000498250 POTEHQ6S545 545 aa15.26■□□□□ 0.03
GOLGA4-211ENST00000498250 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
GOLGA4-211ENST00000498250 RBM42Q9BTD8 480 aaKnown RBP14.97□□□□□ -0.01
GOLGA4-211ENST00000498250 POLA2Q14181 598 aa14.92□□□□□ -0.02
GOLGA4-211ENST00000498250 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
GOLGA4-211ENST00000498250 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
GOLGA4-211ENST00000498250 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
GOLGA4-211ENST00000498250 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
GOLGA4-211ENST00000498250 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
GOLGA4-211ENST00000498250 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
GOLGA4-211ENST00000498250 AKT1S1Q96B36 256 aa14.55□□□□□ -0.08
GOLGA4-211ENST00000498250 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
GOLGA4-211ENST00000498250 REM2Q8IYK8 340 aaPredicted RBP14.38□□□□□ -0.11
GOLGA4-211ENST00000498250 ZBTB22O15209 634 aa14.34□□□□□ -0.11
GOLGA4-211ENST00000498250 ATXN8OSP0DMR3 200 aa14.34□□□□□ -0.11
GOLGA4-211ENST00000498250 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
GOLGA4-211ENST00000498250 FBLN2P98095 1184 aa14.24□□□□□ -0.13
GOLGA4-211ENST00000498250 PIP4P2Q8N4L2 257 aa14.24□□□□□ -0.13
GOLGA4-211ENST00000498250 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
GOLGA4-211ENST00000498250 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
GOLGA4-211ENST00000498250 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
GOLGA4-211ENST00000498250 HAX1O00165 279 aa14.14□□□□□ -0.15
GOLGA4-211ENST00000498250 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
GOLGA4-211ENST00000498250 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
GOLGA4-211ENST00000498250 FXR2P51116 673 aaKnown RBP eCLIP14.12□□□□□ -0.152e-9■■■□□ 15.1
GOLGA4-211ENST00000498250 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
GOLGA4-211ENST00000498250 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
GOLGA4-211ENST00000498250 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
GOLGA4-211ENST00000498250 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
GOLGA4-211ENST00000498250 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
GOLGA4-211ENST00000498250 SSUH2Q9Y2M2 353 aa13.85□□□□□ -0.19
GOLGA4-211ENST00000498250 EVX2Q03828 476 aa13.79□□□□□ -0.2
GOLGA4-211ENST00000498250 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
GOLGA4-211ENST00000498250 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
GOLGA4-211ENST00000498250 C19orf67A6NJJ6 358 aa13.67□□□□□ -0.22
GOLGA4-211ENST00000498250 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
GOLGA4-211ENST00000498250 GABBR2O75899 941 aa13.55□□□□□ -0.24
GOLGA4-211ENST00000498250 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
GOLGA4-211ENST00000498250 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
GOLGA4-211ENST00000498250 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
GOLGA4-211ENST00000498250 LHX8Q68G74 356 aa13.36□□□□□ -0.27
GOLGA4-211ENST00000498250 CLCN6P51797 869 aa13.35□□□□□ -0.27
GOLGA4-211ENST00000498250 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
GOLGA4-211ENST00000498250 DCBLD2Q96PD2 775 aa13.24□□□□□ -0.29
GOLGA4-211ENST00000498250 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
GOLGA4-211ENST00000498250 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
GOLGA4-211ENST00000498250 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
GOLGA4-211ENST00000498250 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
GOLGA4-211ENST00000498250 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
GOLGA4-211ENST00000498250 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
GOLGA4-211ENST00000498250 FKBP8Q14318 412 aa13.05□□□□□ -0.32
GOLGA4-211ENST00000498250 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
GOLGA4-211ENST00000498250 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
GOLGA4-211ENST00000498250 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
GOLGA4-211ENST00000498250 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
GOLGA4-211ENST00000498250 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
GOLGA4-211ENST00000498250 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
GOLGA4-211ENST00000498250 PROM2Q8N271 834 aa12.79□□□□□ -0.36
GOLGA4-211ENST00000498250 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
GOLGA4-211ENST00000498250 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
GOLGA4-211ENST00000498250 MIER1Q8N108 512 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms