RNA–Protein interactions for RNA: ENST00000584279.5

DDX5-228, Transcript of DEAD-box helicase 5, humanhuman

TSL 3

Gene DDX5, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX5-228ENST00000584279 NISCHQ9Y2I1 1504 aa52.08■■■■■ 5.93
DDX5-228ENST00000584279 ABCC9O60706 1549 aa47.63■■■■■ 5.22
DDX5-228ENST00000584279 CCDC180Q9P1Z9 1646 aa46.93■■■■■ 5.1
DDX5-228ENST00000584279 DNAJC5BQ9UF47 199 aa45.3■■■■■ 4.84
DDX5-228ENST00000584279 RB1CC1Q8TDY2 1594 aa44.98■■■■■ 4.79
DDX5-228ENST00000584279 NACADO15069 1562 aa44.53■■■■■ 4.72
DDX5-228ENST00000584279 PABPN1Q86U42 306 aaKnown RBP eCLIP44.28■■■■■ 4.68
DDX5-228ENST00000584279 DCAF8L2P0C7V8 631 aa44.19■■■■■ 4.66
DDX5-228ENST00000584279 UNC13AQ9UPW8 1703 aa44.02■■■■■ 4.64
DDX5-228ENST00000584279 BICRAQ9NZM4 1560 aa43.8■■■■■ 4.6
DDX5-228ENST00000584279 MYO15BQ96JP2 1530 aa43.71■■■■■ 4.59
DDX5-228ENST00000584279 ZCCHC6Q5VYS8 1495 aaKnown RBP43.06■■■■■ 4.48
DDX5-228ENST00000584279 SHROOM4Q9ULL8 1493 aa43.02■■■■■ 4.48
DDX5-228ENST00000584279 CC2D2AQ9P2K1 1620 aa42.97■■■■■ 4.47
DDX5-228ENST00000584279 CECR2Q9BXF3 1484 aa42.95■■■■■ 4.47
DDX5-228ENST00000584279 DCAF1Q9Y4B6 1507 aa42.94■■■■■ 4.46
DDX5-228ENST00000584279 SCRIBQ14160 1630 aa42.82■■■■■ 4.44
DDX5-228ENST00000584279 EIF4G1Q04637 1599 aaKnown RBP42.73■■■■■ 4.43
DDX5-228ENST00000584279 DNAJC5Q9H3Z4 198 aa41.95■■■■■ 4.31
DDX5-228ENST00000584279 CUX2O14529 1486 aa41.24■■■■■ 4.19
DDX5-228ENST00000584279 NCAPD3P42695 1498 aa41.15■■■■■ 4.18
DDX5-228ENST00000584279 ERCC6Q03468 1493 aa41.11■■■■■ 4.17
DDX5-228ENST00000584279 ATAD2BQ9ULI0 1458 aa40.97■■■■■ 4.15
DDX5-228ENST00000584279 NESP48681 1621 aa40.78■■■■■ 4.12
DDX5-228ENST00000584279 HMGXB3Q12766 1538 aa40.77■■■■■ 4.12
DDX5-228ENST00000584279 SMARCA2P51531 1590 aa40.76■■■■■ 4.12
DDX5-228ENST00000584279 SMARCA4P51532 1647 aa40.75■■■■■ 4.11
DDX5-228ENST00000584279 BAZ1BQ9UIG0 1483 aaKnown RBP40.51■■■■■ 4.07
DDX5-228ENST00000584279 THOC2Q8NI27 1593 aaKnown RBP40.45■■■■■ 4.07
DDX5-228ENST00000584279 BAZ1AQ9NRL2 1556 aaPredicted RBP40.42■■■■■ 4.06
DDX5-228ENST00000584279 PEG3Q9GZU2 1588 aa40.35■■■■■ 4.05
DDX5-228ENST00000584279 LAMC3Q9Y6N6 1575 aa40.28■■■■■ 4.04
DDX5-228ENST00000584279 KIF21AQ7Z4S6 1674 aa40.18■■■■■ 4.02
DDX5-228ENST00000584279 MROH2BQ7Z745 1585 aa40.17■■■■■ 4.02
DDX5-228ENST00000584279 PDS5BQ9NTI5 1447 aa40.08■■■■■ 4.01
DDX5-228ENST00000584279 CADPSQ9ULU8 1353 aa39.87■■■■□ 3.97
DDX5-228ENST00000584279 TRIM41Q8WV44 630 aa39.87■■■■□ 3.97
DDX5-228ENST00000584279 MRC2Q9UBG0 1479 aa39.81■■■■□ 3.96
DDX5-228ENST00000584279 WDR62O43379 1518 aa39.74■■■■□ 3.95
DDX5-228ENST00000584279 WIZO95785 1651 aa39.64■■■■□ 3.94
DDX5-228ENST00000584279 CEP164Q9UPV0 1460 aa39.51■■■■□ 3.92
DDX5-228ENST00000584279 FANCD2Q9BXW9 1451 aa39.44■■■■□ 3.9
DDX5-228ENST00000584279 CFTRP13569 1480 aa39.3■■■■□ 3.88
DDX5-228ENST00000584279 OSCARQ8IYS5 282 aa39.24■■■■□ 3.87
DDX5-228ENST00000584279 URB2Q14146 1524 aaKnown RBP39.19■■■■□ 3.86
DDX5-228ENST00000584279 RSF1Q96T23 1441 aaPredicted RBP39.1■■■■□ 3.85
DDX5-228ENST00000584279 TOP2AP11388 1531 aaKnown RBP39.07■■■■□ 3.84
DDX5-228ENST00000584279 RIMBP3CA6NJZ7 1639 aa38.85■■■■□ 3.81
DDX5-228ENST00000584279 RIMBP3BA6NNM3 1639 aa38.85■■■■□ 3.81
DDX5-228ENST00000584279 RIMBP3Q9UFD9 1639 aa38.85■■■■□ 3.81
DDX5-228ENST00000584279 ZNF608Q9ULD9 1512 aaPredicted RBP38.83■■■■□ 3.81
DDX5-228ENST00000584279 PRDM2Q13029 1718 aa38.79■■■■□ 3.8
DDX5-228ENST00000584279 IFT140Q96RY7 1462 aa38.74■■■■□ 3.79
DDX5-228ENST00000584279 ARHGEF11O15085 1522 aa38.68■■■■□ 3.78
DDX5-228ENST00000584279 CCDC88BA6NC98 1476 aa38.66■■■■□ 3.78
DDX5-228ENST00000584279 TOPBP1Q92547 1522 aa38.63■■■■□ 3.78
DDX5-228ENST00000584279 EIF4G3O43432 1585 aaKnown RBP38.53■■■■□ 3.76
DDX5-228ENST00000584279 CYB5RLQ6IPT4 315 aa38.41■■■■□ 3.74
DDX5-228ENST00000584279 DNMBPQ6XZF7 1577 aa38.4■■■■□ 3.74
DDX5-228ENST00000584279 ABCC8Q09428 1581 aa38.4■■■■□ 3.74
DDX5-228ENST00000584279 AQRO60306 1485 aaKnown RBP eCLIP38.37■■■■□ 3.731e-12■■■□□ 17.9
DDX5-228ENST00000584279 CHD1O14646 1710 aa38.34■■■■□ 3.73
DDX5-228ENST00000584279 TARBP1Q13395 1621 aaKnown RBP38.34■■■■□ 3.73
DDX5-228ENST00000584279 ARAP1Q96P48 1450 aa38.29■■■■□ 3.72
DDX5-228ENST00000584279 POLA1P09884 1462 aaPredicted RBP38.21■■■■□ 3.71
DDX5-228ENST00000584279 FBLN2P98095 1184 aa38.19■■■■□ 3.7
DDX5-228ENST00000584279 TRHP20396 242 aaPredicted RBP38.14■■■■□ 3.7
DDX5-228ENST00000584279 RAD54L2Q9Y4B4 1467 aa38.11■■■■□ 3.69
DDX5-228ENST00000584279 TDRD9Q8NDG6 1382 aaKnown RBP38.04■■■■□ 3.68
DDX5-228ENST00000584279 SOGA1O94964 1423 aa37.99■■■■□ 3.67
DDX5-228ENST00000584279 SNAPC4Q5SXM2 1469 aa37.96■■■■□ 3.67
DDX5-228ENST00000584279 CLASP1Q7Z460 1538 aa37.92■■■■□ 3.66
DDX5-228ENST00000584279 FGD5Q6ZNL6 1462 aa37.87■■■■□ 3.65
DDX5-228ENST00000584279 WDR97A6NE52 1622 aa37.81■■■■□ 3.64
DDX5-228ENST00000584279 CHMP7Q8WUX9 453 aaPredicted RBP37.79■■■■□ 3.64
DDX5-228ENST00000584279 MAGI1Q96QZ7 1491 aaPredicted RBP37.77■■■■□ 3.64
DDX5-228ENST00000584279 CUX1P39880 1505 aa37.77■■■■□ 3.64
DDX5-228ENST00000584279 SYNJ1O43426 1573 aa37.77■■■■□ 3.64
DDX5-228ENST00000584279 GRIN2BQ13224 1484 aa37.72■■■■□ 3.63
DDX5-228ENST00000584279 SYNJ2O15056 1496 aa37.67■■■■□ 3.62
DDX5-228ENST00000584279 GAPVD1Q14C86 1478 aa37.53■■■■□ 3.6
DDX5-228ENST00000584279 PBRM1Q86U86 1689 aa37.53■■■■□ 3.6
DDX5-228ENST00000584279 AEBP2Q6ZN18 517 aaPredicted RBP37.44■■■■□ 3.58
DDX5-228ENST00000584279 ABCA5Q8WWZ7 1642 aa37.4■■■■□ 3.58
DDX5-228ENST00000584279 ABCA10Q8WWZ4 1543 aa37.4■■■■□ 3.58
DDX5-228ENST00000584279 ERCC6L2Q5T890 1561 aa37.34■■■■□ 3.57
DDX5-228ENST00000584279 GRIN2AQ12879 1464 aa37.26■■■■□ 3.55
DDX5-228ENST00000584279 CEP170Q5SW79 1584 aa37.18■■■■□ 3.54
DDX5-228ENST00000584279 NUP160Q12769 1436 aa37.18■■■■□ 3.54
DDX5-228ENST00000584279 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
DDX5-228ENST00000584279 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.53
DDX5-228ENST00000584279 SHROOM2Q13796 1616 aa37.05■■■■□ 3.52
DDX5-228ENST00000584279 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
DDX5-228ENST00000584279 BIVM-ERCC5R4GMW8 1640 aa36.95■■■■□ 3.51
DDX5-228ENST00000584279 TOP2BQ02880 1626 aa36.94■■■■□ 3.5
DDX5-228ENST00000584279 KIF13AQ9H1H9 1805 aa36.9■■■■□ 3.5
DDX5-228ENST00000584279 SUPT5HO00267 1087 aaKnown RBP36.9■■■■□ 3.5
DDX5-228ENST00000584279 ERICH3Q5RHP9 1530 aa36.89■■■■□ 3.5
DDX5-228ENST00000584279 PRG4Q92954 1404 aaPredicted RBP36.85■■■■□ 3.49
DDX5-228ENST00000584279 JPH4Q96JJ6 628 aa36.76■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms