Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PGM3-207ENST00000507554 556 ntTSL 45.23□□□□□ -1.575e-7■■■■■ 52.9
U2AF2P26368 MVD-212ENST00000565842 285 ntTSL 326.74■■□□□ 1.873e-49■■■■■ 52.7
U2AF2P26368 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.733e-49■■■■■ 52.7
U2AF2P26368 MVD-204ENST00000562741 217 ntTSL 223.27■■□□□ 1.323e-49■■■■■ 52.7
U2AF2P26368 MVD-210ENST00000565610 507 ntTSL 322.08■■□□□ 1.133e-49■■■■■ 52.7
U2AF2P26368 MVD-208ENST00000563785 888 ntTSL 221.86■■□□□ 1.093e-49■■■■■ 52.7
U2AF2P26368 MVD-214ENST00000567064 758 ntTSL 321.13■□□□□ 0.973e-49■■■■■ 52.7
U2AF2P26368 MVD-216ENST00000568709 809 ntTSL 520.94■□□□□ 0.943e-49■■■■■ 52.7
U2AF2P26368 MVD-217ENST00000569177 870 ntTSL 519.28■□□□□ 0.683e-49■■■■■ 52.7
U2AF2P26368 MVD-206ENST00000563170 904 ntTSL 318.52■□□□□ 0.563e-49■■■■■ 52.7
U2AF2P26368 MVD-215ENST00000568133 853 ntTSL 318.51■□□□□ 0.553e-49■■■■■ 52.7
U2AF2P26368 MVD-207ENST00000563463 543 ntTSL 317.07■□□□□ 0.323e-49■■■■■ 52.7
U2AF2P26368 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.886e-10■■■■■ 52.6
U2AF2P26368 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.236e-10■■■■■ 52.6
U2AF2P26368 ID2-204ENST00000472142 474 ntTSL 22.89□□□□□ -1.955e-11■■■■■ 52.6
U2AF2P26368 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.718e-14■■■■■ 52.4
U2AF2P26368 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC10.02□□□□□ -0.818e-14■■■■■ 52.4
U2AF2P26368 FNIP2-203ENST00000504715 724 ntTSL 511.58□□□□□ -0.563e-7■■■■■ 52.3
U2AF2P26368 FNIP2-202ENST00000504704 3704 ntTSL 1 (best)8.06□□□□□ -1.123e-7■■■■■ 52.3
U2AF2P26368 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.066e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.08□□□□□ -0.166e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC13.38□□□□□ -0.276e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-231ENST00000557336 580 ntTSL 312.3□□□□□ -0.446e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.446e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-232ENST00000557442 1308 ntTSL 211.95□□□□□ -0.56e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC11.83□□□□□ -0.526e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-213ENST00000554891 644 ntTSL 511.78□□□□□ -0.526e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC11.64□□□□□ -0.556e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC11.45□□□□□ -0.586e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC11.27□□□□□ -0.616e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-218ENST00000555215 781 ntTSL 511.08□□□□□ -0.646e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-209ENST00000554383 1039 ntTSL 511.08□□□□□ -0.646e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC10.99□□□□□ -0.656e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC10.94□□□□□ -0.666e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-228ENST00000557033 760 ntTSL 310.87□□□□□ -0.676e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-224ENST00000556226 629 ntTSL 510.87□□□□□ -0.676e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-216ENST00000555137 789 ntTSL 310.52□□□□□ -0.736e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC10.39□□□□□ -0.756e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.826e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-207ENST00000553614 604 ntTSL 59.78□□□□□ -0.846e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-212ENST00000554539 748 ntTSL 59.36□□□□□ -0.916e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.5□□□□□ -1.056e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-215ENST00000555127 929 ntTSL 27.49□□□□□ -1.216e-16■■■■■ 52.2
U2AF2P26368 HNRNPC-233ENST00000557768 599 ntTSL 35.77□□□□□ -1.496e-16■■■■■ 52.2
U2AF2P26368 RCOR1-204ENST00000560472 411 ntTSL 34.53□□□□□ -1.687e-35■■■■■ 52.2
U2AF2P26368 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.421e-13■■■■■ 51.6
U2AF2P26368 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51e-13■■■■■ 51.6
U2AF2P26368 CSPP1-202ENST00000519163 3982 ntTSL 23.42□□□□□ -1.861e-13■■■■■ 51.6
U2AF2P26368 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.923e-7■■■■■ 51.5
U2AF2P26368 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)18.26■□□□□ 0.513e-7■■■■■ 51.5
U2AF2P26368 PRSS53-202ENST00000486499 5489 ntTSL 216.79■□□□□ 0.283e-7■■■■■ 51.5
U2AF2P26368 PPARGC1A-207ENST00000508380 576 ntTSL 45.13□□□□□ -1.596e-11■■■■■ 51.2
U2AF2P26368 HGD-205ENST00000476082 462 ntTSL 55.79□□□□□ -1.483e-10■■■■■ 51
U2AF2P26368 PPWD1-206ENST00000508982 838 ntTSL 213.45□□□□□ -0.261e-22■■■■■ 51
U2AF2P26368 PPWD1-203ENST00000503435 592 ntTSL 410.01□□□□□ -0.811e-22■■■■■ 51
U2AF2P26368 LRPAP1-203ENST00000509198 1170 ntTSL 222.09■■□□□ 1.136e-11■■■■■ 50.8
U2AF2P26368 LRPAP1-201ENST00000296325 1078 ntTSL 1 (best)19.26■□□□□ 0.676e-11■■■■■ 50.8
U2AF2P26368 LRPAP1-204ENST00000515119 1167 ntTSL 216.81■□□□□ 0.286e-11■■■■■ 50.8
U2AF2P26368 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.156e-11■■■■■ 50.8
U2AF2P26368 SLC12A6-215ENST00000560023 550 ntTSL 48.42□□□□□ -1.066e-11■■■■■ 50.8
U2AF2P26368 ATP5C1-207ENST00000472202 782 ntTSL 24.4□□□□□ -1.716e-17■■■■■ 50.5
U2AF2P26368 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.02■□□□□ 0.472e-10■■■■■ 50.5
U2AF2P26368 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-10■■■■■ 50.5
U2AF2P26368 STRN-203ENST00000495595 1026 ntTSL 1 (best)3.11□□□□□ -1.912e-10■■■■■ 50.5
U2AF2P26368 USP36-205ENST00000586531 898 ntTSL 330.85■■■□□ 2.532e-47■■■■■ 50.4
U2AF2P26368 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.96■■□□□ 1.752e-47■■■■■ 50.4
U2AF2P26368 USP36-220ENST00000591942 564 ntTSL 524.32■■□□□ 1.482e-47■■■■■ 50.4
U2AF2P26368 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.115e-16■■■■■ 50.4
U2AF2P26368 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.64■■□□□ 1.052e-47■■■■■ 50.4
U2AF2P26368 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.355e-16■■■■■ 50.4
U2AF2P26368 USP36-210ENST00000588086 3187 ntAPPRIS ALT2 TSL 1 (best)16.92■□□□□ 0.35e-16■■■■■ 50.4
U2AF2P26368 USP36-214ENST00000589225 5885 ntTSL 1 (best)15.87■□□□□ 0.135e-16■■■■■ 50.4
U2AF2P26368 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.075e-16■■■■■ 50.4
U2AF2P26368 USP36-206ENST00000586896 696 ntTSL 515.41■□□□□ 0.062e-47■■■■■ 50.4
U2AF2P26368 SUMF2-206ENST00000413952 881 ntTSL 321.49■■□□□ 1.032e-13■■■■■ 50.4
U2AF2P26368 SUMF2-215ENST00000461912 529 ntTSL 412.05□□□□□ -0.482e-13■■■■■ 50.4
U2AF2P26368 FNIP2-206ENST00000512986 2173 ntTSL 1 (best)12.91□□□□□ -0.342e-7■■■■■ 50.3
U2AF2P26368 FNIP2-201ENST00000264433 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-7■■■■■ 50.3
U2AF2P26368 ZEB1-220ENST00000560909 564 ntTSL 46.3□□□□□ -1.42e-9■■■■■ 49.8
U2AF2P26368 ITIH3-204ENST00000464804 543 ntTSL 418.72■□□□□ 0.597e-21■■■■■ 49.8
U2AF2P26368 SMC4-212ENST00000470240 724 ntTSL 39.18□□□□□ -0.943e-8■■■■■ 49.6
U2AF2P26368 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.092e-9■■■■■ 49.5
U2AF2P26368 COG7-205ENST00000567821 922 ntTSL 511.84□□□□□ -0.515e-11■■■■■ 49.5
U2AF2P26368 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.156e-11■■■■■ 49.5
U2AF2P26368 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.796e-11■■■■■ 49.5
U2AF2P26368 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.366e-11■■■■■ 49.5
U2AF2P26368 PDK1-209ENST00000466437 599 ntTSL 48.71□□□□□ -1.026e-11■■■■■ 49.5
U2AF2P26368 ARNT-206ENST00000497108 546 ntTSL 410.32□□□□□ -0.761e-9■■■■■ 49.5
U2AF2P26368 ARNT-209ENST00000505979 570 ntTSL 29.08□□□□□ -0.961e-9■■■■■ 49.5
U2AF2P26368 ARNT-207ENST00000504358 571 ntTSL 48.94□□□□□ -0.981e-9■■■■■ 49.5
U2AF2P26368 SMC4-219ENST00000487747 637 ntTSL 50.92□□□□□ -2.268e-7■■■■■ 49.4
U2AF2P26368 SMG7-205ENST00000440812 1190 ntTSL 523■■□□□ 1.277e-17■■■■■ 49.3
U2AF2P26368 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 220.36■□□□□ 0.857e-17■■■■■ 49.3
U2AF2P26368 SMG7-203ENST00000367538 328 ntTSL 220.22■□□□□ 0.837e-17■■■■■ 49.3
U2AF2P26368 SMG7-206ENST00000444547 580 ntTSL 419.37■□□□□ 0.697e-17■■■■■ 49.3
U2AF2P26368 SMG7-213ENST00000507691 760 ntTSL 518.66■□□□□ 0.587e-17■■■■■ 49.3
U2AF2P26368 SMG7-210ENST00000502375 566 ntTSL 517.09■□□□□ 0.337e-17■■■■■ 49.3
U2AF2P26368 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.037e-17■■■■■ 49.3
U2AF2P26368 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.267e-17■■■■■ 49.3
U2AF2P26368 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.477e-17■■■■■ 49.3
Retrieved 100 of 36,523 protein–RNA pairs in 104.7 ms