RNA–Protein interactions for RNA: ENST00000383657.9

HACD2-201, Transcript of 3-hydroxyacyl-CoA dehydratase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD2, Length 4,257 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD2-201ENST00000383657 NISCHQ9Y2I1 1504 aa28.15■■■□□ 2.1
HACD2-201ENST00000383657 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
HACD2-201ENST00000383657 SHROOM4Q9ULL8 1493 aa25.25■■□□□ 1.63
HACD2-201ENST00000383657 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
HACD2-201ENST00000383657 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
HACD2-201ENST00000383657 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
HACD2-201ENST00000383657 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
HACD2-201ENST00000383657 ABCC9O60706 1549 aa23.51■■□□□ 1.35
HACD2-201ENST00000383657 FAM9AQ8IZU1 332 aaPredicted RBP23.37■■□□□ 1.33
HACD2-201ENST00000383657 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
HACD2-201ENST00000383657 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
HACD2-201ENST00000383657 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.26
HACD2-201ENST00000383657 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
HACD2-201ENST00000383657 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
HACD2-201ENST00000383657 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
HACD2-201ENST00000383657 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
HACD2-201ENST00000383657 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
HACD2-201ENST00000383657 UBTFP17480 764 aaKnown RBP22.55■■□□□ 1.2
HACD2-201ENST00000383657 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
HACD2-201ENST00000383657 APLP2Q06481 763 aa22.49■■□□□ 1.19
HACD2-201ENST00000383657 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
HACD2-201ENST00000383657 NACADO15069 1562 aa22.4■■□□□ 1.18
HACD2-201ENST00000383657 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
HACD2-201ENST00000383657 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
HACD2-201ENST00000383657 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
HACD2-201ENST00000383657 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
HACD2-201ENST00000383657 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
HACD2-201ENST00000383657 HRCP23327 699 aa22.1■■□□□ 1.13
HACD2-201ENST00000383657 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
HACD2-201ENST00000383657 ZEB1P37275 1124 aaPredicted RBP22.02■■□□□ 1.12
HACD2-201ENST00000383657 ATP1B4Q9UN42 357 aaPredicted RBP22.01■■□□□ 1.11
HACD2-201ENST00000383657 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
HACD2-201ENST00000383657 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
HACD2-201ENST00000383657 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
HACD2-201ENST00000383657 HNRNPUL2Q1KMD3 747 aaKnown RBP21.71■■□□□ 1.07
HACD2-201ENST00000383657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.66■■□□□ 1.06
HACD2-201ENST00000383657 WIZO95785 1651 aa21.61■■□□□ 1.05
HACD2-201ENST00000383657 ITGAEP38570 1179 aa21.61■■□□□ 1.05
HACD2-201ENST00000383657 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
HACD2-201ENST00000383657 CCDC88BA6NC98 1476 aa21.51■■□□□ 1.03
HACD2-201ENST00000383657 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
HACD2-201ENST00000383657 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
HACD2-201ENST00000383657 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
HACD2-201ENST00000383657 SMARCA4P51532 1647 aa21.36■■□□□ 1.01
HACD2-201ENST00000383657 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
HACD2-201ENST00000383657 EEA1Q15075 1411 aa21.32■■□□□ 1
HACD2-201ENST00000383657 SOGA1O94964 1423 aa21.32■■□□□ 1
HACD2-201ENST00000383657 CEP162Q5TB80 1403 aa21.27■■□□□ 1
HACD2-201ENST00000383657 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
HACD2-201ENST00000383657 FAM50AQ14320 339 aaKnown RBP21.24■□□□□ 0.99
HACD2-201ENST00000383657 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
HACD2-201ENST00000383657 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
HACD2-201ENST00000383657 CLIP1P30622 1438 aa21.21■□□□□ 0.99
HACD2-201ENST00000383657 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
HACD2-201ENST00000383657 CENPBP07199 599 aaPredicted RBP21.18■□□□□ 0.98
HACD2-201ENST00000383657 YTHDC1Q96MU7 727 aaKnown RBP21.14■□□□□ 0.97
HACD2-201ENST00000383657 FBLN2P98095 1184 aa21.11■□□□□ 0.97
HACD2-201ENST00000383657 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
HACD2-201ENST00000383657 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
HACD2-201ENST00000383657 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
HACD2-201ENST00000383657 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
HACD2-201ENST00000383657 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
HACD2-201ENST00000383657 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
HACD2-201ENST00000383657 CUX2O14529 1486 aa20.89■□□□□ 0.93
HACD2-201ENST00000383657 BICRAQ9NZM4 1560 aa20.88■□□□□ 0.93
HACD2-201ENST00000383657 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
HACD2-201ENST00000383657 TRIM52Q96A61 297 aa20.83■□□□□ 0.93
HACD2-201ENST00000383657 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
HACD2-201ENST00000383657 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
HACD2-201ENST00000383657 CARMIL1Q5VZK9 1371 aa20.8■□□□□ 0.92
HACD2-201ENST00000383657 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
HACD2-201ENST00000383657 RAPGEF2Q9Y4G8 1499 aa20.75■□□□□ 0.91
HACD2-201ENST00000383657 PELP1Q8IZL8 1130 aaKnown RBP20.74■□□□□ 0.91
HACD2-201ENST00000383657 VPS8Q8N3P4 1428 aa20.73■□□□□ 0.91
HACD2-201ENST00000383657 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
HACD2-201ENST00000383657 MYT1LQ9UL68 1186 aa20.7■□□□□ 0.9
HACD2-201ENST00000383657 MTUS2Q5JR59 1369 aa20.68■□□□□ 0.9
HACD2-201ENST00000383657 CHMP7Q8WUX9 453 aaPredicted RBP20.66■□□□□ 0.9
HACD2-201ENST00000383657 CDK11AQ9UQ88 783 aaPredicted RBP20.64■□□□□ 0.89
HACD2-201ENST00000383657 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
HACD2-201ENST00000383657 POLR3GLQ9BT43 218 aa20.64■□□□□ 0.89
HACD2-201ENST00000383657 ZNF777Q9ULD5 760 aaPredicted RBP20.63■□□□□ 0.89
HACD2-201ENST00000383657 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
HACD2-201ENST00000383657 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
HACD2-201ENST00000383657 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
HACD2-201ENST00000383657 CHIC2Q9UKJ5 165 aa20.59■□□□□ 0.89
HACD2-201ENST00000383657 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
HACD2-201ENST00000383657 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
HACD2-201ENST00000383657 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
HACD2-201ENST00000383657 CFTRP13569 1480 aa20.51■□□□□ 0.87
HACD2-201ENST00000383657 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
HACD2-201ENST00000383657 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
HACD2-201ENST00000383657 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
HACD2-201ENST00000383657 FGD5Q6ZNL6 1462 aa20.47■□□□□ 0.87
HACD2-201ENST00000383657 ZNF326Q5BKZ1 582 aaKnown RBP20.46■□□□□ 0.87
HACD2-201ENST00000383657 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
HACD2-201ENST00000383657 IGF1RP08069 1367 aa20.45■□□□□ 0.86
HACD2-201ENST00000383657 NEFLP07196 543 aa20.44■□□□□ 0.86
HACD2-201ENST00000383657 RRP7BPQ9NSQ0 103 aa20.42■□□□□ 0.86
HACD2-201ENST00000383657 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms