RNA–Protein interactions for RNA: ENST00000393677.8

ZFYVE27-206, Transcript of zinc finger FYVE-type containing 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ZFYVE27, Length 3,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE27-206ENST00000393677 NISCHQ9Y2I1 1504 aa23.98■■□□□ 1.43
ZFYVE27-206ENST00000393677 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
ZFYVE27-206ENST00000393677 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
ZFYVE27-206ENST00000393677 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
ZFYVE27-206ENST00000393677 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
ZFYVE27-206ENST00000393677 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
ZFYVE27-206ENST00000393677 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
ZFYVE27-206ENST00000393677 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
ZFYVE27-206ENST00000393677 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
ZFYVE27-206ENST00000393677 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
ZFYVE27-206ENST00000393677 HRCP23327 699 aa19.54■□□□□ 0.72
ZFYVE27-206ENST00000393677 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
ZFYVE27-206ENST00000393677 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
ZFYVE27-206ENST00000393677 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
ZFYVE27-206ENST00000393677 FAM9AQ8IZU1 332 aaPredicted RBP19.28■□□□□ 0.68
ZFYVE27-206ENST00000393677 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
ZFYVE27-206ENST00000393677 RSF1Q96T23 1441 aaPredicted RBP19.15■□□□□ 0.66
ZFYVE27-206ENST00000393677 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
ZFYVE27-206ENST00000393677 ABCC9O60706 1549 aa19.1■□□□□ 0.65
ZFYVE27-206ENST00000393677 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
ZFYVE27-206ENST00000393677 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
ZFYVE27-206ENST00000393677 CECR2Q9BXF3 1484 aa18.94■□□□□ 0.62
ZFYVE27-206ENST00000393677 MROH2BQ7Z745 1585 aa18.79■□□□□ 0.6
ZFYVE27-206ENST00000393677 TTBK1Q5TCY1 1321 aaPredicted RBP18.69■□□□□ 0.58
ZFYVE27-206ENST00000393677 WIZO95785 1651 aa18.67■□□□□ 0.58
ZFYVE27-206ENST00000393677 NACADO15069 1562 aa18.61■□□□□ 0.57
ZFYVE27-206ENST00000393677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
ZFYVE27-206ENST00000393677 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
ZFYVE27-206ENST00000393677 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.543e-8■□□□□ 9
ZFYVE27-206ENST00000393677 ABCC8Q09428 1581 aa18.43■□□□□ 0.54
ZFYVE27-206ENST00000393677 CCDC88BA6NC98 1476 aa18.38■□□□□ 0.53
ZFYVE27-206ENST00000393677 CCER1Q8TC90 406 aaPredicted RBP18.38■□□□□ 0.53
ZFYVE27-206ENST00000393677 BAZ1AQ9NRL2 1556 aaPredicted RBP18.36■□□□□ 0.53
ZFYVE27-206ENST00000393677 SOGA1O94964 1423 aa18.31■□□□□ 0.52
ZFYVE27-206ENST00000393677 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
ZFYVE27-206ENST00000393677 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
ZFYVE27-206ENST00000393677 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
ZFYVE27-206ENST00000393677 RANGAP1P46060 587 aaPredicted RBP18.21■□□□□ 0.51
ZFYVE27-206ENST00000393677 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
ZFYVE27-206ENST00000393677 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
ZFYVE27-206ENST00000393677 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
ZFYVE27-206ENST00000393677 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
ZFYVE27-206ENST00000393677 SMARCA2P51531 1590 aa18.18■□□□□ 0.5
ZFYVE27-206ENST00000393677 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
ZFYVE27-206ENST00000393677 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.49
ZFYVE27-206ENST00000393677 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
ZFYVE27-206ENST00000393677 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
ZFYVE27-206ENST00000393677 DIEXFQ68CQ4 756 aaKnown RBP18.02■□□□□ 0.48
ZFYVE27-206ENST00000393677 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
ZFYVE27-206ENST00000393677 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
ZFYVE27-206ENST00000393677 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
ZFYVE27-206ENST00000393677 GOLGA3Q08378 1498 aa17.9■□□□□ 0.46
ZFYVE27-206ENST00000393677 ACIN1Q9UKV3 1341 aaKnown RBP17.88■□□□□ 0.45
ZFYVE27-206ENST00000393677 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
ZFYVE27-206ENST00000393677 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
ZFYVE27-206ENST00000393677 EEA1Q15075 1411 aa17.85■□□□□ 0.45
ZFYVE27-206ENST00000393677 CLIP1P30622 1438 aa17.82■□□□□ 0.44
ZFYVE27-206ENST00000393677 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
ZFYVE27-206ENST00000393677 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
ZFYVE27-206ENST00000393677 RAPGEF2Q9Y4G8 1499 aa17.8■□□□□ 0.44
ZFYVE27-206ENST00000393677 APLP2Q06481 763 aa17.8■□□□□ 0.44
ZFYVE27-206ENST00000393677 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
ZFYVE27-206ENST00000393677 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
ZFYVE27-206ENST00000393677 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.43
ZFYVE27-206ENST00000393677 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
ZFYVE27-206ENST00000393677 MIER1Q8N108 512 aa17.69■□□□□ 0.42
ZFYVE27-206ENST00000393677 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
ZFYVE27-206ENST00000393677 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
ZFYVE27-206ENST00000393677 VPS8Q8N3P4 1428 aa17.67■□□□□ 0.42
ZFYVE27-206ENST00000393677 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
ZFYVE27-206ENST00000393677 ITGAEP38570 1179 aa17.61■□□□□ 0.41
ZFYVE27-206ENST00000393677 KIF21BO75037 1637 aa17.61■□□□□ 0.41
ZFYVE27-206ENST00000393677 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
ZFYVE27-206ENST00000393677 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
ZFYVE27-206ENST00000393677 PRXQ9BXM0 1461 aa17.43■□□□□ 0.38
ZFYVE27-206ENST00000393677 CUX1P39880 1505 aa17.43■□□□□ 0.38
ZFYVE27-206ENST00000393677 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
ZFYVE27-206ENST00000393677 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
ZFYVE27-206ENST00000393677 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.38
ZFYVE27-206ENST00000393677 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
ZFYVE27-206ENST00000393677 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
ZFYVE27-206ENST00000393677 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
ZFYVE27-206ENST00000393677 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
ZFYVE27-206ENST00000393677 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
ZFYVE27-206ENST00000393677 CUX2O14529 1486 aa17.29■□□□□ 0.36
ZFYVE27-206ENST00000393677 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
ZFYVE27-206ENST00000393677 CFTRP13569 1480 aa17.28■□□□□ 0.36
ZFYVE27-206ENST00000393677 FAM50AQ14320 339 aaKnown RBP17.27■□□□□ 0.35
ZFYVE27-206ENST00000393677 IGF1RP08069 1367 aa17.26■□□□□ 0.35
ZFYVE27-206ENST00000393677 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
ZFYVE27-206ENST00000393677 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
ZFYVE27-206ENST00000393677 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
ZFYVE27-206ENST00000393677 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
ZFYVE27-206ENST00000393677 HIRIP3Q9BW71 556 aaPredicted RBP17.21■□□□□ 0.35
ZFYVE27-206ENST00000393677 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
ZFYVE27-206ENST00000393677 CARMIL1Q5VZK9 1371 aa17.2■□□□□ 0.34
ZFYVE27-206ENST00000393677 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
ZFYVE27-206ENST00000393677 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
ZFYVE27-206ENST00000393677 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
ZFYVE27-206ENST00000393677 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms