RNA–Protein interactions for RNA: ENST00000555100.1

ALKBH1-203, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

TSL 3

Gene ALKBH1, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-203ENST00000555100 NISCHQ9Y2I1 1504 aa33■■■□□ 2.87
ALKBH1-203ENST00000555100 ABCC9O60706 1549 aa30.17■■■□□ 2.42
ALKBH1-203ENST00000555100 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
ALKBH1-203ENST00000555100 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
ALKBH1-203ENST00000555100 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
ALKBH1-203ENST00000555100 NACADO15069 1562 aa28.26■■■□□ 2.11
ALKBH1-203ENST00000555100 PABPN1Q86U42 306 aaKnown RBP eCLIP28.09■■■□□ 2.09
ALKBH1-203ENST00000555100 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
ALKBH1-203ENST00000555100 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
ALKBH1-203ENST00000555100 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
ALKBH1-203ENST00000555100 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
ALKBH1-203ENST00000555100 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
ALKBH1-203ENST00000555100 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.96
ALKBH1-203ENST00000555100 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
ALKBH1-203ENST00000555100 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
ALKBH1-203ENST00000555100 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.95
ALKBH1-203ENST00000555100 EIF4G1Q04637 1599 aaKnown RBP27.07■■□□□ 1.92
ALKBH1-203ENST00000555100 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
ALKBH1-203ENST00000555100 DNAJC5Q9H3Z4 198 aa26.77■■□□□ 1.88
ALKBH1-203ENST00000555100 CUX2O14529 1486 aa26.23■■□□□ 1.79
ALKBH1-203ENST00000555100 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
ALKBH1-203ENST00000555100 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
ALKBH1-203ENST00000555100 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
ALKBH1-203ENST00000555100 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
ALKBH1-203ENST00000555100 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
ALKBH1-203ENST00000555100 NESP48681 1621 aa25.8■■□□□ 1.72
ALKBH1-203ENST00000555100 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
ALKBH1-203ENST00000555100 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
ALKBH1-203ENST00000555100 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
ALKBH1-203ENST00000555100 THOC2Q8NI27 1593 aaKnown RBP25.57■■□□□ 1.68
ALKBH1-203ENST00000555100 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
ALKBH1-203ENST00000555100 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
ALKBH1-203ENST00000555100 PDS5BQ9NTI5 1447 aa25.49■■□□□ 1.67
ALKBH1-203ENST00000555100 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
ALKBH1-203ENST00000555100 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
ALKBH1-203ENST00000555100 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
ALKBH1-203ENST00000555100 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
ALKBH1-203ENST00000555100 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
ALKBH1-203ENST00000555100 WDR62O43379 1518 aa25.18■■□□□ 1.62
ALKBH1-203ENST00000555100 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
ALKBH1-203ENST00000555100 OSCARQ8IYS5 282 aa25.02■■□□□ 1.6
ALKBH1-203ENST00000555100 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
ALKBH1-203ENST00000555100 WIZO95785 1651 aa24.99■■□□□ 1.59
ALKBH1-203ENST00000555100 CFTRP13569 1480 aa24.96■■□□□ 1.59
ALKBH1-203ENST00000555100 URB2Q14146 1524 aaKnown RBP24.81■■□□□ 1.56
ALKBH1-203ENST00000555100 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
ALKBH1-203ENST00000555100 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
ALKBH1-203ENST00000555100 IFT140Q96RY7 1462 aa24.6■■□□□ 1.53
ALKBH1-203ENST00000555100 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
ALKBH1-203ENST00000555100 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
ALKBH1-203ENST00000555100 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
ALKBH1-203ENST00000555100 ZNF608Q9ULD9 1512 aaPredicted RBP24.58■■□□□ 1.53
ALKBH1-203ENST00000555100 ARHGEF11O15085 1522 aa24.52■■□□□ 1.52
ALKBH1-203ENST00000555100 CCDC88BA6NC98 1476 aa24.49■■□□□ 1.51
ALKBH1-203ENST00000555100 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
ALKBH1-203ENST00000555100 ABCC8Q09428 1581 aa24.43■■□□□ 1.5
ALKBH1-203ENST00000555100 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
ALKBH1-203ENST00000555100 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
ALKBH1-203ENST00000555100 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
ALKBH1-203ENST00000555100 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.49
ALKBH1-203ENST00000555100 DNMBPQ6XZF7 1577 aa24.31■■□□□ 1.48
ALKBH1-203ENST00000555100 TRHP20396 242 aaPredicted RBP24.26■■□□□ 1.47
ALKBH1-203ENST00000555100 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
ALKBH1-203ENST00000555100 TARBP1Q13395 1621 aaKnown RBP24.25■■□□□ 1.47
ALKBH1-203ENST00000555100 FBLN2P98095 1184 aa24.25■■□□□ 1.47
ALKBH1-203ENST00000555100 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.47
ALKBH1-203ENST00000555100 CHD1O14646 1710 aa24.15■■□□□ 1.46
ALKBH1-203ENST00000555100 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
ALKBH1-203ENST00000555100 SOGA1O94964 1423 aa24.12■■□□□ 1.45
ALKBH1-203ENST00000555100 RAD54L2Q9Y4B4 1467 aa24.12■■□□□ 1.45
ALKBH1-203ENST00000555100 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
ALKBH1-203ENST00000555100 SNAPC4Q5SXM2 1469 aa24.03■■□□□ 1.44
ALKBH1-203ENST00000555100 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
ALKBH1-203ENST00000555100 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
ALKBH1-203ENST00000555100 FGD5Q6ZNL6 1462 aa23.97■■□□□ 1.43
ALKBH1-203ENST00000555100 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
ALKBH1-203ENST00000555100 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
ALKBH1-203ENST00000555100 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
ALKBH1-203ENST00000555100 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
ALKBH1-203ENST00000555100 CUX1P39880 1505 aa23.89■■□□□ 1.41
ALKBH1-203ENST00000555100 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
ALKBH1-203ENST00000555100 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
ALKBH1-203ENST00000555100 ABCA10Q8WWZ4 1543 aa23.71■■□□□ 1.39
ALKBH1-203ENST00000555100 ABCA5Q8WWZ7 1642 aa23.63■■□□□ 1.37
ALKBH1-203ENST00000555100 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
ALKBH1-203ENST00000555100 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
ALKBH1-203ENST00000555100 NUP160Q12769 1436 aa23.59■■□□□ 1.37
ALKBH1-203ENST00000555100 ERCC6L2Q5T890 1561 aa23.58■■□□□ 1.37
ALKBH1-203ENST00000555100 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
ALKBH1-203ENST00000555100 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
ALKBH1-203ENST00000555100 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
ALKBH1-203ENST00000555100 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
ALKBH1-203ENST00000555100 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
ALKBH1-203ENST00000555100 JPH4Q96JJ6 628 aa23.39■■□□□ 1.33
ALKBH1-203ENST00000555100 PRG4Q92954 1404 aaPredicted RBP23.39■■□□□ 1.33
ALKBH1-203ENST00000555100 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
ALKBH1-203ENST00000555100 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
ALKBH1-203ENST00000555100 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
ALKBH1-203ENST00000555100 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.32
ALKBH1-203ENST00000555100 FAM69CQ0P6D2 419 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms