Protein–RNA interactions for Protein: Q96LT9

RNPC3, RNA-binding protein 40, humanhuman

Known RBP Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3Q96LT9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
RNPC3Q96LT9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNPC3Q96LT9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.43■■□□□ 1.82
RNPC3Q96LT9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNPC3Q96LT9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 WHAMMP3-201ENST00000611636 1609 ntBASIC26.42■■□□□ 1.82
RNPC3Q96LT9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNPC3Q96LT9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNPC3Q96LT9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.41■■□□□ 1.82
RNPC3Q96LT9 AC120024.1-201ENST00000562672 995 ntBASIC26.41■■□□□ 1.82
RNPC3Q96LT9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.41■■□□□ 1.82
RNPC3Q96LT9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RNPC3Q96LT9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.4■■□□□ 1.82
RNPC3Q96LT9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RNPC3Q96LT9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.39■■□□□ 1.82
RNPC3Q96LT9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RNPC3Q96LT9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNPC3Q96LT9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RNPC3Q96LT9 KRT18P10-201ENST00000388836 1287 ntBASIC26.39■■□□□ 1.82
RNPC3Q96LT9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNPC3Q96LT9 RARRES2P6-201ENST00000567333 442 ntBASIC26.39■■□□□ 1.82
RNPC3Q96LT9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.39■■□□□ 1.82
RNPC3Q96LT9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
RNPC3Q96LT9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNPC3Q96LT9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNPC3Q96LT9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.38■■□□□ 1.81
RNPC3Q96LT9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNPC3Q96LT9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.38■■□□□ 1.81
RNPC3Q96LT9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.38■■□□□ 1.81
RNPC3Q96LT9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.38■■□□□ 1.81
RNPC3Q96LT9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RNPC3Q96LT9 MIR3621-201ENST00000580529 85 ntBASIC26.38■■□□□ 1.81
RNPC3Q96LT9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNPC3Q96LT9 AC133561.4-201ENST00000566112 224 ntBASIC26.37■■□□□ 1.81
RNPC3Q96LT9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNPC3Q96LT9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNPC3Q96LT9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNPC3Q96LT9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RNPC3Q96LT9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNPC3Q96LT9 AC010997.5-201ENST00000609182 354 ntBASIC26.36■■□□□ 1.81
RNPC3Q96LT9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.36■■□□□ 1.81
RNPC3Q96LT9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
RNPC3Q96LT9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
RNPC3Q96LT9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.35■■□□□ 1.81
RNPC3Q96LT9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNPC3Q96LT9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNPC3Q96LT9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.34■■□□□ 1.81
RNPC3Q96LT9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
RNPC3Q96LT9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.34■■□□□ 1.81
RNPC3Q96LT9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.34■■□□□ 1.81
RNPC3Q96LT9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RNPC3Q96LT9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
RNPC3Q96LT9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
RNPC3Q96LT9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNPC3Q96LT9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNPC3Q96LT9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.33■■□□□ 1.81
RNPC3Q96LT9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.33■■□□□ 1.81
RNPC3Q96LT9 AL356740.2-201ENST00000601559 647 ntBASIC26.33■■□□□ 1.81
RNPC3Q96LT9 MIR6724-1-201ENST00000616420 92 ntBASIC26.33■■□□□ 1.81
RNPC3Q96LT9 MIR6724-2-201ENST00000616483 92 ntBASIC26.33■■□□□ 1.81
RNPC3Q96LT9 MIR6724-4-201ENST00000617390 92 ntBASIC26.33■■□□□ 1.81
RNPC3Q96LT9 MIR6724-3-201ENST00000622482 92 ntBASIC26.33■■□□□ 1.81
RNPC3Q96LT9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNPC3Q96LT9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RNPC3Q96LT9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNPC3Q96LT9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
RNPC3Q96LT9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
RNPC3Q96LT9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 ZNRF2P3-201ENST00000424200 374 ntBASIC26.32■■□□□ 1.8
RNPC3Q96LT9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 MIR4466-201ENST00000606121 54 ntBASIC26.32■■□□□ 1.8
RNPC3Q96LT9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNPC3Q96LT9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
RNPC3Q96LT9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.31■■□□□ 1.8
RNPC3Q96LT9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNPC3Q96LT9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RNPC3Q96LT9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.31■■□□□ 1.8
RNPC3Q96LT9 AL449106.1-201ENST00000608517 1980 ntBASIC26.31■■□□□ 1.8
RNPC3Q96LT9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RNPC3Q96LT9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNPC3Q96LT9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNPC3Q96LT9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNPC3Q96LT9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNPC3Q96LT9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.3■■□□□ 1.8
RNPC3Q96LT9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms