Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF183Q96D59 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF183Q96D59 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF183Q96D59 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF183Q96D59 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF183Q96D59 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF183Q96D59 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF183Q96D59 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF183Q96D59 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.37
RNF183Q96D59 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF183Q96D59 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF183Q96D59 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF183Q96D59 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF183Q96D59 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF183Q96D59 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF183Q96D59 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF183Q96D59 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF183Q96D59 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RNF183Q96D59 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF183Q96D59 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF183Q96D59 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF183Q96D59 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF183Q96D59 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF183Q96D59 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF183Q96D59 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF183Q96D59 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF183Q96D59 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RNF183Q96D59 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF183Q96D59 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF183Q96D59 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF183Q96D59 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF183Q96D59 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF183Q96D59 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF183Q96D59 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF183Q96D59 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF183Q96D59 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF183Q96D59 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF183Q96D59 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF183Q96D59 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF183Q96D59 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF183Q96D59 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF183Q96D59 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF183Q96D59 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF183Q96D59 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF183Q96D59 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF183Q96D59 KRT18P24-201ENST00000344739 1156 ntBASIC17.3■□□□□ 0.36
RNF183Q96D59 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF183Q96D59 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF183Q96D59 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RNF183Q96D59 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF183Q96D59 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF183Q96D59 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF183Q96D59 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
RNF183Q96D59 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF183Q96D59 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF183Q96D59 AL592295.1-201ENST00000400984 884 ntBASIC17.29■□□□□ 0.36
RNF183Q96D59 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF183Q96D59 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF183Q96D59 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF183Q96D59 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RNF183Q96D59 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF183Q96D59 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF183Q96D59 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF183Q96D59 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF183Q96D59 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF183Q96D59 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF183Q96D59 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF183Q96D59 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF183Q96D59 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF183Q96D59 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF183Q96D59 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF183Q96D59 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF183Q96D59 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF183Q96D59 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF183Q96D59 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF183Q96D59 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF183Q96D59 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.27■□□□□ 0.36
RNF183Q96D59 THA1P-201ENST00000590384 1145 ntBASIC17.27■□□□□ 0.36
RNF183Q96D59 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF183Q96D59 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF183Q96D59 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF183Q96D59 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF183Q96D59 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF183Q96D59 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RNF183Q96D59 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF183Q96D59 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RNF183Q96D59 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF183Q96D59 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF183Q96D59 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF183Q96D59 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF183Q96D59 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF183Q96D59 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF183Q96D59 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF183Q96D59 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF183Q96D59 Z92544.1-202ENST00000571933 1220 ntBASIC17.26■□□□□ 0.35
RNF183Q96D59 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF183Q96D59 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF183Q96D59 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF183Q96D59 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF183Q96D59 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms