Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPO4Q2I0M5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RSPO4Q2I0M5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RSPO4Q2I0M5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RSPO4Q2I0M5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
RSPO4Q2I0M5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.23■■□□□ 1.31
RSPO4Q2I0M5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.22■■□□□ 1.31
RSPO4Q2I0M5 AL137784.2-201ENST00000607332 1000 ntBASIC23.22■■□□□ 1.31
RSPO4Q2I0M5 ID1-201ENST00000376105 1233 ntBASIC23.21■■□□□ 1.31
RSPO4Q2I0M5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.21■■□□□ 1.31
RSPO4Q2I0M5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RSPO4Q2I0M5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPO4Q2I0M5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
RSPO4Q2I0M5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.2■■□□□ 1.3
RSPO4Q2I0M5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.2■■□□□ 1.3
RSPO4Q2I0M5 AC022517.1-201ENST00000592429 346 ntBASIC23.2■■□□□ 1.3
RSPO4Q2I0M5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
RSPO4Q2I0M5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.19■■□□□ 1.3
RSPO4Q2I0M5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPO4Q2I0M5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.19■■□□□ 1.3
RSPO4Q2I0M5 AC004448.1-201ENST00000458332 883 ntBASIC23.19■■□□□ 1.3
RSPO4Q2I0M5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.19■■□□□ 1.3
RSPO4Q2I0M5 AC011551.1-201ENST00000614101 683 ntBASIC23.19■■□□□ 1.3
RSPO4Q2I0M5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPO4Q2I0M5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO4Q2I0M5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO4Q2I0M5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.18■■□□□ 1.3
RSPO4Q2I0M5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO4Q2I0M5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO4Q2I0M5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO4Q2I0M5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO4Q2I0M5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO4Q2I0M5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO4Q2I0M5 CA15P2-201ENST00000611168 834 ntBASIC23.17■■□□□ 1.3
RSPO4Q2I0M5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO4Q2I0M5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.17■■□□□ 1.3
RSPO4Q2I0M5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO4Q2I0M5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO4Q2I0M5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO4Q2I0M5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.16■■□□□ 1.3
RSPO4Q2I0M5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.16■■□□□ 1.3
RSPO4Q2I0M5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO4Q2I0M5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RSPO4Q2I0M5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RSPO4Q2I0M5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RSPO4Q2I0M5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.15■■□□□ 1.3
RSPO4Q2I0M5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RSPO4Q2I0M5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RSPO4Q2I0M5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
RSPO4Q2I0M5 AC139426.1-201ENST00000568218 2529 ntBASIC23.14■■□□□ 1.3
RSPO4Q2I0M5 IRS3P-201ENST00000223076 1006 ntBASIC23.14■■□□□ 1.29
RSPO4Q2I0M5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPO4Q2I0M5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.14■■□□□ 1.29
RSPO4Q2I0M5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RSPO4Q2I0M5 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.14■■□□□ 1.29
RSPO4Q2I0M5 ABCB10P3-201ENST00000561950 2166 ntBASIC23.14■■□□□ 1.29
RSPO4Q2I0M5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 RASA4CP-201ENST00000424092 1398 ntBASIC23.13■■□□□ 1.29
RSPO4Q2I0M5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO4Q2I0M5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO4Q2I0M5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.12■■□□□ 1.29
RSPO4Q2I0M5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO4Q2I0M5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.12■■□□□ 1.29
RSPO4Q2I0M5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO4Q2I0M5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO4Q2I0M5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.11■■□□□ 1.29
RSPO4Q2I0M5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO4Q2I0M5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO4Q2I0M5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.11■■□□□ 1.29
RSPO4Q2I0M5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.1■■□□□ 1.29
RSPO4Q2I0M5 DUX4L19-201ENST00000557448 1267 ntBASIC23.1■■□□□ 1.29
RSPO4Q2I0M5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.1■■□□□ 1.29
RSPO4Q2I0M5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RSPO4Q2I0M5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RSPO4Q2I0M5 ESRRAP2-201ENST00000418437 1549 ntBASIC23.09■■□□□ 1.29
RSPO4Q2I0M5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
RSPO4Q2I0M5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.09■■□□□ 1.29
RSPO4Q2I0M5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RSPO4Q2I0M5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RSPO4Q2I0M5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RSPO4Q2I0M5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.09■■□□□ 1.29
RSPO4Q2I0M5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RSPO4Q2I0M5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RSPO4Q2I0M5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.08■■□□□ 1.29
RSPO4Q2I0M5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RSPO4Q2I0M5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.08■■□□□ 1.29
RSPO4Q2I0M5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RSPO4Q2I0M5 ST7-AS1-201ENST00000456775 1889 ntBASIC23.08■■□□□ 1.29
RSPO4Q2I0M5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms