Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.88■■□□□ 1.25
SLC6A12P48065 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SLC6A12P48065 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.88■■□□□ 1.25
SLC6A12P48065 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
SLC6A12P48065 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.87■■□□□ 1.25
SLC6A12P48065 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC6A12P48065 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
SLC6A12P48065 AC087393.1-201ENST00000582896 145 ntBASIC22.87■■□□□ 1.25
SLC6A12P48065 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.87■■□□□ 1.25
SLC6A12P48065 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SLC6A12P48065 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.87■■□□□ 1.25
SLC6A12P48065 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC6A12P48065 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SLC6A12P48065 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
SLC6A12P48065 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC6A12P48065 NTF6A-201ENST00000591175 560 ntBASIC22.86■■□□□ 1.25
SLC6A12P48065 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC6A12P48065 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC6A12P48065 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.86■■□□□ 1.25
SLC6A12P48065 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A12P48065 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A12P48065 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A12P48065 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
SLC6A12P48065 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A12P48065 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.85■■□□□ 1.25
SLC6A12P48065 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A12P48065 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.85■■□□□ 1.25
SLC6A12P48065 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.85■■□□□ 1.25
SLC6A12P48065 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A12P48065 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A12P48065 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A12P48065 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.84■■□□□ 1.25
SLC6A12P48065 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A12P48065 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A12P48065 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A12P48065 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A12P48065 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC6A12P48065 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A12P48065 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.83■■□□□ 1.25
SLC6A12P48065 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A12P48065 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A12P48065 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A12P48065 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SLC6A12P48065 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A12P48065 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.82■■□□□ 1.24
SLC6A12P48065 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A12P48065 AC093323.1-202ENST00000635031 2045 ntBASIC22.82■■□□□ 1.24
SLC6A12P48065 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A12P48065 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A12P48065 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.82■■□□□ 1.24
SLC6A12P48065 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.82■■□□□ 1.24
SLC6A12P48065 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A12P48065 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A12P48065 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A12P48065 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A12P48065 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A12P48065 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
SLC6A12P48065 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A12P48065 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A12P48065 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A12P48065 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A12P48065 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A12P48065 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC6A12P48065 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A12P48065 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A12P48065 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC6A12P48065 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A12P48065 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A12P48065 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.79■■□□□ 1.24
SLC6A12P48065 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
SLC6A12P48065 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A12P48065 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.78■■□□□ 1.24
SLC6A12P48065 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SLC6A12P48065 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.78■■□□□ 1.24
SLC6A12P48065 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.78■■□□□ 1.24
SLC6A12P48065 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.78■■□□□ 1.24
SLC6A12P48065 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.78■■□□□ 1.24
SLC6A12P48065 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SLC6A12P48065 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SLC6A12P48065 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A12P48065 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A12P48065 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A12P48065 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.77■■□□□ 1.24
SLC6A12P48065 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A12P48065 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A12P48065 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A12P48065 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A12P48065 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A12P48065 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.23
SLC6A12P48065 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SLC6A12P48065 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
SLC6A12P48065 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.76■■□□□ 1.23
SLC6A12P48065 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SLC6A12P48065 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SLC6A12P48065 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
SLC6A12P48065 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SLC6A12P48065 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SLC6A12P48065 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.75■■□□□ 1.23
SLC6A12P48065 LONRF2P2-201ENST00000439212 571 ntBASIC22.75■■□□□ 1.23
SLC6A12P48065 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms