Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.76■□□□□ 0.91
ERCC1P07992 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC1P07992 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC1P07992 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC1P07992 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC1P07992 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ERCC1P07992 AC139795.1-202ENST00000500444 432 ntBASIC20.76■□□□□ 0.91
ERCC1P07992 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC1P07992 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.76■□□□□ 0.91
ERCC1P07992 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC1P07992 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC1P07992 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC1P07992 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC1P07992 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC1P07992 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC1P07992 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC1P07992 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ERCC1P07992 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.75■□□□□ 0.91
ERCC1P07992 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC1P07992 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC1P07992 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC1P07992 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC1P07992 DUX4L9-201ENST00000449051 1259 ntBASIC20.74■□□□□ 0.91
ERCC1P07992 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.74■□□□□ 0.91
ERCC1P07992 AC074183.2-201ENST00000623112 922 ntBASIC20.74■□□□□ 0.91
ERCC1P07992 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC1P07992 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC1P07992 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC1P07992 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC1P07992 AC138932.3-201ENST00000567634 1902 ntBASIC20.73■□□□□ 0.91
ERCC1P07992 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC1P07992 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC1P07992 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC1P07992 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC1P07992 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC1P07992 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC1P07992 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC1P07992 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC1P07992 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ERCC1P07992 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC1P07992 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC1P07992 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC1P07992 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ERCC1P07992 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC1P07992 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ERCC1P07992 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC1P07992 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC1P07992 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC1P07992 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.7■□□□□ 0.9
ERCC1P07992 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC1P07992 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC1P07992 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC1P07992 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC1P07992 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC1P07992 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC1P07992 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC1P07992 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC1P07992 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC1P07992 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC1P07992 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC1P07992 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC1P07992 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC1P07992 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC1P07992 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC1P07992 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC1P07992 AL139125.2-201ENST00000623134 1869 ntBASIC20.69■□□□□ 0.9
ERCC1P07992 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC1P07992 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC1P07992 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC1P07992 KRT18P10-201ENST00000388836 1287 ntBASIC20.67■□□□□ 0.9
ERCC1P07992 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC1P07992 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC1P07992 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.67■□□□□ 0.9
ERCC1P07992 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC1P07992 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC1P07992 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC1P07992 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC1P07992 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC1P07992 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC1P07992 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ERCC1P07992 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.65■□□□□ 0.9
ERCC1P07992 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC1P07992 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC1P07992 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC1P07992 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC1P07992 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC1P07992 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.65■□□□□ 0.9
ERCC1P07992 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.65■□□□□ 0.9
ERCC1P07992 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC1P07992 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.65■□□□□ 0.9
ERCC1P07992 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC1P07992 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.64■□□□□ 0.9
ERCC1P07992 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC1P07992 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC1P07992 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC1P07992 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC1P07992 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC1P07992 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC1P07992 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC1P07992 AC097639.1-201ENST00000565519 1891 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms