Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 AC135731.1-201ENST00000569415 2548 ntBASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV1A0A0A0MS02 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRGV1A0A0A0MS02 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
TRGV1A0A0A0MS02 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.03■□□□□ 0.32
TRGV1A0A0A0MS02 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.03■□□□□ 0.32
TRGV1A0A0A0MS02 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 AL592293.1-201ENST00000502889 1188 ntBASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV1A0A0A0MS02 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TRGV1A0A0A0MS02 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRGV1A0A0A0MS02 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TRGV1A0A0A0MS02 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRGV1A0A0A0MS02 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRGV1A0A0A0MS02 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRGV1A0A0A0MS02 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRGV1A0A0A0MS02 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.01■□□□□ 0.31
TRGV1A0A0A0MS02 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.01■□□□□ 0.31
TRGV1A0A0A0MS02 AC018755.3-202ENST00000596210 929 ntBASIC17.01■□□□□ 0.31
TRGV1A0A0A0MS02 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 AC138932.3-201ENST00000567634 1902 ntBASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 SLC6A10P-202ENST00000431994 2058 ntBASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRGV1A0A0A0MS02 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.99■□□□□ 0.31
TRGV1A0A0A0MS02 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRGV1A0A0A0MS02 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRGV1A0A0A0MS02 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 ABHD17AP5-201ENST00000580133 923 ntBASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 U85056.1-201ENST00000616429 682 ntBASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRGV1A0A0A0MS02 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRGV1A0A0A0MS02 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRGV1A0A0A0MS02 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRGV1A0A0A0MS02 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.95■□□□□ 0.3
TRGV1A0A0A0MS02 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRGV1A0A0A0MS02 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.95■□□□□ 0.3
TRGV1A0A0A0MS02 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRGV1A0A0A0MS02 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms