Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHAC2Q9Y5I4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHAC2Q9Y5I4 AC131281.2-201ENST00000520478 145 ntBASIC28.66■■■□□ 2.18
PCDHAC2Q9Y5I4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHAC2Q9Y5I4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHAC2Q9Y5I4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHAC2Q9Y5I4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHAC2Q9Y5I4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.65■■■□□ 2.18
PCDHAC2Q9Y5I4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHAC2Q9Y5I4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHAC2Q9Y5I4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHAC2Q9Y5I4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PCDHAC2Q9Y5I4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.64■■■□□ 2.18
PCDHAC2Q9Y5I4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.64■■■□□ 2.18
PCDHAC2Q9Y5I4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.63■■■□□ 2.17
PCDHAC2Q9Y5I4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHAC2Q9Y5I4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHAC2Q9Y5I4 MIR638-201ENST00000385237 100 ntBASIC28.62■■■□□ 2.17
PCDHAC2Q9Y5I4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHAC2Q9Y5I4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.62■■■□□ 2.17
PCDHAC2Q9Y5I4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHAC2Q9Y5I4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHAC2Q9Y5I4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHAC2Q9Y5I4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHAC2Q9Y5I4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
PCDHAC2Q9Y5I4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHAC2Q9Y5I4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHAC2Q9Y5I4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
PCDHAC2Q9Y5I4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.6■■■□□ 2.17
PCDHAC2Q9Y5I4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.6■■■□□ 2.17
PCDHAC2Q9Y5I4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHAC2Q9Y5I4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHAC2Q9Y5I4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHAC2Q9Y5I4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHAC2Q9Y5I4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.58■■■□□ 2.17
PCDHAC2Q9Y5I4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.58■■■□□ 2.17
PCDHAC2Q9Y5I4 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.58■■■□□ 2.17
PCDHAC2Q9Y5I4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
PCDHAC2Q9Y5I4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHAC2Q9Y5I4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHAC2Q9Y5I4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.57■■■□□ 2.16
PCDHAC2Q9Y5I4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHAC2Q9Y5I4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.57■■■□□ 2.16
PCDHAC2Q9Y5I4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.57■■■□□ 2.16
PCDHAC2Q9Y5I4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.57■■■□□ 2.16
PCDHAC2Q9Y5I4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHAC2Q9Y5I4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.56■■■□□ 2.16
PCDHAC2Q9Y5I4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.56■■■□□ 2.16
PCDHAC2Q9Y5I4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC28.56■■■□□ 2.16
PCDHAC2Q9Y5I4 AL117332.1-201ENST00000622628 974 ntBASIC28.56■■■□□ 2.16
PCDHAC2Q9Y5I4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHAC2Q9Y5I4 AC142086.6-201ENST00000621154 1765 ntBASIC28.55■■■□□ 2.16
PCDHAC2Q9Y5I4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHAC2Q9Y5I4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHAC2Q9Y5I4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHAC2Q9Y5I4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
PCDHAC2Q9Y5I4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.54■■■□□ 2.16
PCDHAC2Q9Y5I4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.54■■■□□ 2.16
PCDHAC2Q9Y5I4 AC010997.5-201ENST00000609182 354 ntBASIC28.54■■■□□ 2.16
PCDHAC2Q9Y5I4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
PCDHAC2Q9Y5I4 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.54■■■□□ 2.16
PCDHAC2Q9Y5I4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.54■■■□□ 2.16
PCDHAC2Q9Y5I4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHAC2Q9Y5I4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.53■■■□□ 2.16
PCDHAC2Q9Y5I4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.53■■■□□ 2.16
PCDHAC2Q9Y5I4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.53■■■□□ 2.16
PCDHAC2Q9Y5I4 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.53■■■□□ 2.16
PCDHAC2Q9Y5I4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHAC2Q9Y5I4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
PCDHAC2Q9Y5I4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHAC2Q9Y5I4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.52■■■□□ 2.16
PCDHAC2Q9Y5I4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 AL136116.3-201ENST00000402907 1138 ntBASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHAC2Q9Y5I4 AL139246.5-201ENST00000606645 996 ntBASIC28.5■■■□□ 2.15
PCDHAC2Q9Y5I4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.5■■■□□ 2.15
PCDHAC2Q9Y5I4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHAC2Q9Y5I4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
PCDHAC2Q9Y5I4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHAC2Q9Y5I4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.49■■■□□ 2.15
PCDHAC2Q9Y5I4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.49■■■□□ 2.15
PCDHAC2Q9Y5I4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC28.49■■■□□ 2.15
PCDHAC2Q9Y5I4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHAC2Q9Y5I4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms