Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.66■■■□□ 2.5
PDZRN3Q9UPQ7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PDZRN3Q9UPQ7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PDZRN3Q9UPQ7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.65■■■□□ 2.5
PDZRN3Q9UPQ7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.65■■■□□ 2.5
PDZRN3Q9UPQ7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.65■■■□□ 2.5
PDZRN3Q9UPQ7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.65■■■□□ 2.5
PDZRN3Q9UPQ7 AC020928.2-201ENST00000588717 2197 ntBASIC30.65■■■□□ 2.5
PDZRN3Q9UPQ7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
PDZRN3Q9UPQ7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.64■■■□□ 2.5
PDZRN3Q9UPQ7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PDZRN3Q9UPQ7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
PDZRN3Q9UPQ7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PDZRN3Q9UPQ7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.64■■■□□ 2.5
PDZRN3Q9UPQ7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.64■■■□□ 2.5
PDZRN3Q9UPQ7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PDZRN3Q9UPQ7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PDZRN3Q9UPQ7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.63■■■□□ 2.49
PDZRN3Q9UPQ7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.63■■■□□ 2.49
PDZRN3Q9UPQ7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PDZRN3Q9UPQ7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.61■■■□□ 2.49
PDZRN3Q9UPQ7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PDZRN3Q9UPQ7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.6■■■□□ 2.49
PDZRN3Q9UPQ7 LONRF2P2-201ENST00000439212 571 ntBASIC30.6■■■□□ 2.49
PDZRN3Q9UPQ7 RPS2P7-201ENST00000447334 885 ntBASIC30.6■■■□□ 2.49
PDZRN3Q9UPQ7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.6■■■□□ 2.49
PDZRN3Q9UPQ7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
PDZRN3Q9UPQ7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PDZRN3Q9UPQ7 AC008406.3-201ENST00000620001 1374 ntBASIC30.6■■■□□ 2.49
PDZRN3Q9UPQ7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
PDZRN3Q9UPQ7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PDZRN3Q9UPQ7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PDZRN3Q9UPQ7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDZRN3Q9UPQ7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PDZRN3Q9UPQ7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.59■■■□□ 2.49
PDZRN3Q9UPQ7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDZRN3Q9UPQ7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
PDZRN3Q9UPQ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.58■■■□□ 2.49
PDZRN3Q9UPQ7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.58■■■□□ 2.49
PDZRN3Q9UPQ7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.58■■■□□ 2.49
PDZRN3Q9UPQ7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PDZRN3Q9UPQ7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PDZRN3Q9UPQ7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PDZRN3Q9UPQ7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
PDZRN3Q9UPQ7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.57■■■□□ 2.48
PDZRN3Q9UPQ7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PDZRN3Q9UPQ7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PDZRN3Q9UPQ7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PDZRN3Q9UPQ7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PDZRN3Q9UPQ7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PDZRN3Q9UPQ7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PDZRN3Q9UPQ7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
PDZRN3Q9UPQ7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PDZRN3Q9UPQ7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PDZRN3Q9UPQ7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.56■■■□□ 2.48
PDZRN3Q9UPQ7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDZRN3Q9UPQ7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
PDZRN3Q9UPQ7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PDZRN3Q9UPQ7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PDZRN3Q9UPQ7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PDZRN3Q9UPQ7 AC022616.5-201ENST00000518796 181 ntBASIC30.53■■■□□ 2.48
PDZRN3Q9UPQ7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.53■■■□□ 2.48
PDZRN3Q9UPQ7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 KRT125P-201ENST00000546827 989 ntBASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PDZRN3Q9UPQ7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PDZRN3Q9UPQ7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PDZRN3Q9UPQ7 KRT18P10-201ENST00000388836 1287 ntBASIC30.51■■■□□ 2.47
PDZRN3Q9UPQ7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.51■■■□□ 2.47
PDZRN3Q9UPQ7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
PDZRN3Q9UPQ7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
PDZRN3Q9UPQ7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PDZRN3Q9UPQ7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.5■■■□□ 2.47
PDZRN3Q9UPQ7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.5■■■□□ 2.47
PDZRN3Q9UPQ7 ERN1-208ENST00000606895 2068 ntBASIC30.5■■■□□ 2.47
PDZRN3Q9UPQ7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms