Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGC3Q9UN70 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PCDHGC3Q9UN70 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGC3Q9UN70 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.16■■□□□ 1.62
PCDHGC3Q9UN70 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGC3Q9UN70 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGC3Q9UN70 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGC3Q9UN70 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGC3Q9UN70 AC087393.1-201ENST00000582896 145 ntBASIC25.15■■□□□ 1.62
PCDHGC3Q9UN70 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHGC3Q9UN70 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGC3Q9UN70 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHGC3Q9UN70 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGC3Q9UN70 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGC3Q9UN70 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGC3Q9UN70 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHGC3Q9UN70 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHGC3Q9UN70 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHGC3Q9UN70 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
PCDHGC3Q9UN70 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
PCDHGC3Q9UN70 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
PCDHGC3Q9UN70 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHGC3Q9UN70 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
PCDHGC3Q9UN70 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGC3Q9UN70 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGC3Q9UN70 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGC3Q9UN70 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGC3Q9UN70 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHGC3Q9UN70 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGC3Q9UN70 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGC3Q9UN70 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
PCDHGC3Q9UN70 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGC3Q9UN70 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGC3Q9UN70 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGC3Q9UN70 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGC3Q9UN70 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGC3Q9UN70 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHGC3Q9UN70 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
PCDHGC3Q9UN70 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PCDHGC3Q9UN70 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PCDHGC3Q9UN70 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC3Q9UN70 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGC3Q9UN70 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGC3Q9UN70 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGC3Q9UN70 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHGC3Q9UN70 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.08■■□□□ 1.61
PCDHGC3Q9UN70 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHGC3Q9UN70 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGC3Q9UN70 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHGC3Q9UN70 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 FOXO3B-201ENST00000395675 1928 ntBASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 AC138932.3-201ENST00000567634 1902 ntBASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGC3Q9UN70 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHGC3Q9UN70 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 AC004987.1-201ENST00000428627 508 ntBASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHGC3Q9UN70 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHGC3Q9UN70 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGC3Q9UN70 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGC3Q9UN70 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGC3Q9UN70 ATP5G2P3-201ENST00000429083 425 ntBASIC25.04■■□□□ 1.6
PCDHGC3Q9UN70 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms