Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USB1Q9BQ65 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USB1Q9BQ65 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USB1Q9BQ65 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
USB1Q9BQ65 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USB1Q9BQ65 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USB1Q9BQ65 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.97■□□□□ 0.95
USB1Q9BQ65 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USB1Q9BQ65 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USB1Q9BQ65 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USB1Q9BQ65 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
USB1Q9BQ65 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USB1Q9BQ65 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USB1Q9BQ65 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.97■□□□□ 0.95
USB1Q9BQ65 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
USB1Q9BQ65 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USB1Q9BQ65 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.96■□□□□ 0.95
USB1Q9BQ65 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USB1Q9BQ65 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.96■□□□□ 0.95
USB1Q9BQ65 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.96■□□□□ 0.95
USB1Q9BQ65 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.96■□□□□ 0.95
USB1Q9BQ65 PVT1_1.1-201ENST00000615125 194 ntBASIC20.96■□□□□ 0.95
USB1Q9BQ65 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.96■□□□□ 0.95
USB1Q9BQ65 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USB1Q9BQ65 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USB1Q9BQ65 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USB1Q9BQ65 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
USB1Q9BQ65 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USB1Q9BQ65 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USB1Q9BQ65 AC103834.1-201ENST00000520383 144 ntBASIC20.95■□□□□ 0.94
USB1Q9BQ65 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.95■□□□□ 0.94
USB1Q9BQ65 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USB1Q9BQ65 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.95■□□□□ 0.94
USB1Q9BQ65 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USB1Q9BQ65 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USB1Q9BQ65 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USB1Q9BQ65 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USB1Q9BQ65 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.94■□□□□ 0.94
USB1Q9BQ65 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.93■□□□□ 0.94
USB1Q9BQ65 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USB1Q9BQ65 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
USB1Q9BQ65 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USB1Q9BQ65 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USB1Q9BQ65 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
USB1Q9BQ65 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
USB1Q9BQ65 KRT8P33-201ENST00000508125 1423 ntBASIC20.93■□□□□ 0.94
USB1Q9BQ65 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USB1Q9BQ65 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USB1Q9BQ65 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.93■□□□□ 0.94
USB1Q9BQ65 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
USB1Q9BQ65 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USB1Q9BQ65 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USB1Q9BQ65 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USB1Q9BQ65 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.92■□□□□ 0.94
USB1Q9BQ65 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
USB1Q9BQ65 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
USB1Q9BQ65 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
USB1Q9BQ65 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USB1Q9BQ65 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USB1Q9BQ65 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USB1Q9BQ65 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USB1Q9BQ65 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USB1Q9BQ65 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
USB1Q9BQ65 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.9■□□□□ 0.94
USB1Q9BQ65 AL031848.2-201ENST00000607670 837 ntBASIC20.9■□□□□ 0.94
USB1Q9BQ65 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USB1Q9BQ65 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USB1Q9BQ65 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.89■□□□□ 0.94
USB1Q9BQ65 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USB1Q9BQ65 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.89■□□□□ 0.94
USB1Q9BQ65 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.89■□□□□ 0.94
USB1Q9BQ65 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
USB1Q9BQ65 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.89■□□□□ 0.93
USB1Q9BQ65 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.89■□□□□ 0.93
USB1Q9BQ65 AL035685.1-201ENST00000636663 812 ntBASIC20.89■□□□□ 0.93
USB1Q9BQ65 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USB1Q9BQ65 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USB1Q9BQ65 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.89■□□□□ 0.93
USB1Q9BQ65 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USB1Q9BQ65 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USB1Q9BQ65 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.89■□□□□ 0.93
USB1Q9BQ65 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USB1Q9BQ65 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USB1Q9BQ65 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USB1Q9BQ65 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USB1Q9BQ65 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.88■□□□□ 0.93
USB1Q9BQ65 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USB1Q9BQ65 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
USB1Q9BQ65 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
USB1Q9BQ65 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USB1Q9BQ65 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USB1Q9BQ65 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USB1Q9BQ65 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.87■□□□□ 0.93
USB1Q9BQ65 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USB1Q9BQ65 AC103724.3-201ENST00000564481 992 ntBASIC20.87■□□□□ 0.93
USB1Q9BQ65 AL451085.2-201ENST00000605085 799 ntBASIC20.87■□□□□ 0.93
USB1Q9BQ65 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USB1Q9BQ65 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USB1Q9BQ65 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.87■□□□□ 0.93
USB1Q9BQ65 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms