Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 MIR6724-2-201ENST00000616483 92 ntBASIC23.54■■□□□ 1.36
PCDH15Q96QU1 MIR6724-4-201ENST00000617390 92 ntBASIC23.54■■□□□ 1.36
PCDH15Q96QU1 MIR6724-3-201ENST00000622482 92 ntBASIC23.54■■□□□ 1.36
PCDH15Q96QU1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH15Q96QU1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH15Q96QU1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDH15Q96QU1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH15Q96QU1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH15Q96QU1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH15Q96QU1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PCDH15Q96QU1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PCDH15Q96QU1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH15Q96QU1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDH15Q96QU1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH15Q96QU1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PCDH15Q96QU1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH15Q96QU1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH15Q96QU1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PCDH15Q96QU1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH15Q96QU1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH15Q96QU1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH15Q96QU1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH15Q96QU1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH15Q96QU1 AC010997.5-201ENST00000609182 354 ntBASIC23.5■■□□□ 1.35
PCDH15Q96QU1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH15Q96QU1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH15Q96QU1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH15Q96QU1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.49■■□□□ 1.35
PCDH15Q96QU1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH15Q96QU1 MTDHP2-201ENST00000601468 714 ntBASIC23.49■■□□□ 1.35
PCDH15Q96QU1 AC011551.1-201ENST00000614101 683 ntBASIC23.49■■□□□ 1.35
PCDH15Q96QU1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH15Q96QU1 BX255925.1-201ENST00000566954 1854 ntBASIC23.49■■□□□ 1.35
PCDH15Q96QU1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH15Q96QU1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH15Q96QU1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH15Q96QU1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDH15Q96QU1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDH15Q96QU1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDH15Q96QU1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH15Q96QU1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH15Q96QU1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.47■■□□□ 1.35
PCDH15Q96QU1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDH15Q96QU1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH15Q96QU1 AC142472.1-201ENST00000612013 1741 ntBASIC23.46■■□□□ 1.35
PCDH15Q96QU1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDH15Q96QU1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH15Q96QU1 AC096631.2-201ENST00000436136 790 ntBASIC23.46■■□□□ 1.35
PCDH15Q96QU1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH15Q96QU1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH15Q96QU1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDH15Q96QU1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.45■■□□□ 1.35
PCDH15Q96QU1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.45■■□□□ 1.35
PCDH15Q96QU1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH15Q96QU1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH15Q96QU1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDH15Q96QU1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH15Q96QU1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH15Q96QU1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.43■■□□□ 1.34
PCDH15Q96QU1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH15Q96QU1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH15Q96QU1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH15Q96QU1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH15Q96QU1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
PCDH15Q96QU1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH15Q96QU1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH15Q96QU1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH15Q96QU1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.41■■□□□ 1.34
PCDH15Q96QU1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH15Q96QU1 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.41■■□□□ 1.34
PCDH15Q96QU1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDH15Q96QU1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDH15Q96QU1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH15Q96QU1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH15Q96QU1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PCDH15Q96QU1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDH15Q96QU1 AL356740.2-201ENST00000601559 647 ntBASIC23.39■■□□□ 1.33
PCDH15Q96QU1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH15Q96QU1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH15Q96QU1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH15Q96QU1 RARRES2P6-201ENST00000567333 442 ntBASIC23.38■■□□□ 1.33
PCDH15Q96QU1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms