Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SNRNP40Q96DI7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNRNP40Q96DI7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.59■■□□□ 1.05
SNRNP40Q96DI7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP40Q96DI7 MTDHP2-201ENST00000601468 714 ntBASIC21.59■■□□□ 1.05
SNRNP40Q96DI7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP40Q96DI7 AC110285.6-201ENST00000617652 491 ntBASIC21.59■■□□□ 1.05
SNRNP40Q96DI7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
SNRNP40Q96DI7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 AL356740.2-201ENST00000601559 647 ntBASIC21.58■■□□□ 1.05
SNRNP40Q96DI7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNRNP40Q96DI7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SNRNP40Q96DI7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNRNP40Q96DI7 AC142472.1-201ENST00000612013 1741 ntBASIC21.58■■□□□ 1.04
SNRNP40Q96DI7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
SNRNP40Q96DI7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRNP40Q96DI7 AC005837.3-201ENST00000612163 286 ntBASIC21.56■■□□□ 1.04
SNRNP40Q96DI7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
SNRNP40Q96DI7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
SNRNP40Q96DI7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 AC096631.2-201ENST00000436136 790 ntBASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRNP40Q96DI7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRNP40Q96DI7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.54■■□□□ 1.04
SNRNP40Q96DI7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNRNP40Q96DI7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.54■■□□□ 1.04
SNRNP40Q96DI7 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.54■■□□□ 1.04
SNRNP40Q96DI7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNRNP40Q96DI7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNRNP40Q96DI7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.53■■□□□ 1.04
SNRNP40Q96DI7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.53■■□□□ 1.04
SNRNP40Q96DI7 MIR4466-201ENST00000606121 54 ntBASIC21.53■■□□□ 1.04
SNRNP40Q96DI7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNRNP40Q96DI7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.53■■□□□ 1.04
SNRNP40Q96DI7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.53■■□□□ 1.04
SNRNP40Q96DI7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNRNP40Q96DI7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNRNP40Q96DI7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.52■■□□□ 1.04
SNRNP40Q96DI7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.52■■□□□ 1.04
SNRNP40Q96DI7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.52■■□□□ 1.04
SNRNP40Q96DI7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.52■■□□□ 1.04
SNRNP40Q96DI7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.52■■□□□ 1.04
SNRNP40Q96DI7 AC011551.1-201ENST00000614101 683 ntBASIC21.52■■□□□ 1.04
SNRNP40Q96DI7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.51■■□□□ 1.03
SNRNP40Q96DI7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNRNP40Q96DI7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.51■■□□□ 1.03
SNRNP40Q96DI7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SNRNP40Q96DI7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNRNP40Q96DI7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNRNP40Q96DI7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP40Q96DI7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP40Q96DI7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.5■■□□□ 1.03
SNRNP40Q96DI7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNRNP40Q96DI7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNRNP40Q96DI7 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.49■■□□□ 1.03
SNRNP40Q96DI7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNRNP40Q96DI7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.48■■□□□ 1.03
SNRNP40Q96DI7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.48■■□□□ 1.03
SNRNP40Q96DI7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.47■■□□□ 1.03
SNRNP40Q96DI7 AP004609.3-201ENST00000610705 1884 ntBASIC21.47■■□□□ 1.03
SNRNP40Q96DI7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP40Q96DI7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP40Q96DI7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRNP40Q96DI7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SNRNP40Q96DI7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 AC133561.4-201ENST00000566112 224 ntBASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 AL512631.2-201ENST00000604634 923 ntBASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP40Q96DI7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms