Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.39■□□□□ 0.21
ALMS1Q8TCU4 AP001330.3-201ENST00000520123 633 ntBASIC16.39■□□□□ 0.21
ALMS1Q8TCU4 AL355001.2-201ENST00000620617 1191 ntBASIC16.39■□□□□ 0.21
ALMS1Q8TCU4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.39■□□□□ 0.21
ALMS1Q8TCU4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.39■□□□□ 0.21
ALMS1Q8TCU4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.39■□□□□ 0.21
ALMS1Q8TCU4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALMS1Q8TCU4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.39■□□□□ 0.21
ALMS1Q8TCU4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.38■□□□□ 0.21
ALMS1Q8TCU4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 PBX2P1-201ENST00000493219 1291 ntBASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 AC090192.1-201ENST00000517740 490 ntBASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.37■□□□□ 0.21
ALMS1Q8TCU4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ALMS1Q8TCU4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ALMS1Q8TCU4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ALMS1Q8TCU4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
ALMS1Q8TCU4 MIR939-201ENST00000401314 82 ntBASIC16.36■□□□□ 0.21
ALMS1Q8TCU4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.36■□□□□ 0.21
ALMS1Q8TCU4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALMS1Q8TCU4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
ALMS1Q8TCU4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALMS1Q8TCU4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ALMS1Q8TCU4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALMS1Q8TCU4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALMS1Q8TCU4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.34■□□□□ 0.21
ALMS1Q8TCU4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ALMS1Q8TCU4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALMS1Q8TCU4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALMS1Q8TCU4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALMS1Q8TCU4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALMS1Q8TCU4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.33■□□□□ 0.2
ALMS1Q8TCU4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALMS1Q8TCU4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ALMS1Q8TCU4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ALMS1Q8TCU4 AF213884.3-201ENST00000563833 479 ntBASIC16.32■□□□□ 0.2
ALMS1Q8TCU4 AC097381.1-201ENST00000429019 1296 ntBASIC16.32■□□□□ 0.2
ALMS1Q8TCU4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.32■□□□□ 0.2
ALMS1Q8TCU4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ALMS1Q8TCU4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.32■□□□□ 0.2
ALMS1Q8TCU4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ALMS1Q8TCU4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 AL449106.1-201ENST00000608517 1980 ntBASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 AL136162.1-201ENST00000607711 1078 ntBASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 KRT18P10-201ENST00000388836 1287 ntBASIC16.3■□□□□ 0.2
ALMS1Q8TCU4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ALMS1Q8TCU4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.29■□□□□ 0.2
ALMS1Q8TCU4 AL136967.2-201ENST00000623968 743 ntBASIC16.29■□□□□ 0.2
ALMS1Q8TCU4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
ALMS1Q8TCU4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALMS1Q8TCU4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.27■□□□□ 0.2
ALMS1Q8TCU4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALMS1Q8TCU4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALMS1Q8TCU4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.27■□□□□ 0.2
ALMS1Q8TCU4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.27■□□□□ 0.2
ALMS1Q8TCU4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.27■□□□□ 0.2
ALMS1Q8TCU4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.27■□□□□ 0.2
ALMS1Q8TCU4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ALMS1Q8TCU4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms