Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 DUX4L18-201ENST00000553347 1267 ntBASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
SMARCC2Q8TAQ2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMARCC2Q8TAQ2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMARCC2Q8TAQ2 DUX4L9-201ENST00000449051 1259 ntBASIC27.85■■■□□ 2.05
SMARCC2Q8TAQ2 SPCS2P3-201ENST00000500401 656 ntBASIC27.85■■■□□ 2.05
SMARCC2Q8TAQ2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMARCC2Q8TAQ2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SMARCC2Q8TAQ2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.85■■■□□ 2.05
SMARCC2Q8TAQ2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SMARCC2Q8TAQ2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SMARCC2Q8TAQ2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
SMARCC2Q8TAQ2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SMARCC2Q8TAQ2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.83■■■□□ 2.05
SMARCC2Q8TAQ2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SMARCC2Q8TAQ2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
SMARCC2Q8TAQ2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
SMARCC2Q8TAQ2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMARCC2Q8TAQ2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 SLC6A10P-202ENST00000431994 2058 ntBASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC2Q8TAQ2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.8■■■□□ 2.04
SMARCC2Q8TAQ2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SMARCC2Q8TAQ2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.8■■■□□ 2.04
SMARCC2Q8TAQ2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.8■■■□□ 2.04
SMARCC2Q8TAQ2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SMARCC2Q8TAQ2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC2Q8TAQ2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC2Q8TAQ2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC2Q8TAQ2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
SMARCC2Q8TAQ2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
SMARCC2Q8TAQ2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC2Q8TAQ2 AC018755.3-202ENST00000596210 929 ntBASIC27.79■■■□□ 2.04
SMARCC2Q8TAQ2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 MIR6765-201ENST00000614092 87 ntBASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.78■■■□□ 2.04
SMARCC2Q8TAQ2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.77■■■□□ 2.04
SMARCC2Q8TAQ2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.77■■■□□ 2.04
SMARCC2Q8TAQ2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SMARCC2Q8TAQ2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMARCC2Q8TAQ2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMARCC2Q8TAQ2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
SMARCC2Q8TAQ2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMARCC2Q8TAQ2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
SMARCC2Q8TAQ2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
SMARCC2Q8TAQ2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.76■■■□□ 2.03
SMARCC2Q8TAQ2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.76■■■□□ 2.03
SMARCC2Q8TAQ2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
SMARCC2Q8TAQ2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.76■■■□□ 2.03
SMARCC2Q8TAQ2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SMARCC2Q8TAQ2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMARCC2Q8TAQ2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMARCC2Q8TAQ2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMARCC2Q8TAQ2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.75■■■□□ 2.03
SMARCC2Q8TAQ2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SMARCC2Q8TAQ2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 AC093323.1-202ENST00000635031 2045 ntBASIC27.74■■■□□ 2.03
SMARCC2Q8TAQ2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
SMARCC2Q8TAQ2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SMARCC2Q8TAQ2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms