Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AL512631.2-201ENST00000604634 923 ntBASIC30.67■■■□□ 2.5
LINC00116Q8NCU8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
LINC00116Q8NCU8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.67■■■□□ 2.5
LINC00116Q8NCU8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LINC00116Q8NCU8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.67■■■□□ 2.5
LINC00116Q8NCU8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LINC00116Q8NCU8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.66■■■□□ 2.5
LINC00116Q8NCU8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.66■■■□□ 2.5
LINC00116Q8NCU8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LINC00116Q8NCU8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LINC00116Q8NCU8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.66■■■□□ 2.5
LINC00116Q8NCU8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LINC00116Q8NCU8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
LINC00116Q8NCU8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
LINC00116Q8NCU8 AL356740.2-201ENST00000601559 647 ntBASIC30.65■■■□□ 2.5
LINC00116Q8NCU8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.64■■■□□ 2.5
LINC00116Q8NCU8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.64■■■□□ 2.5
LINC00116Q8NCU8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LINC00116Q8NCU8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LINC00116Q8NCU8 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.63■■■□□ 2.49
LINC00116Q8NCU8 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.62■■■□□ 2.49
LINC00116Q8NCU8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.62■■■□□ 2.49
LINC00116Q8NCU8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
LINC00116Q8NCU8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
LINC00116Q8NCU8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
LINC00116Q8NCU8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LINC00116Q8NCU8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.61■■■□□ 2.49
LINC00116Q8NCU8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LINC00116Q8NCU8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
LINC00116Q8NCU8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
LINC00116Q8NCU8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.6■■■□□ 2.49
LINC00116Q8NCU8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.6■■■□□ 2.49
LINC00116Q8NCU8 AC011551.1-201ENST00000614101 683 ntBASIC30.6■■■□□ 2.49
LINC00116Q8NCU8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
LINC00116Q8NCU8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LINC00116Q8NCU8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
LINC00116Q8NCU8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LINC00116Q8NCU8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LINC00116Q8NCU8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.57■■■□□ 2.48
LINC00116Q8NCU8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.57■■■□□ 2.48
LINC00116Q8NCU8 AC133561.4-201ENST00000566112 224 ntBASIC30.57■■■□□ 2.48
LINC00116Q8NCU8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.57■■■□□ 2.48
LINC00116Q8NCU8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
LINC00116Q8NCU8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LINC00116Q8NCU8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
LINC00116Q8NCU8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
LINC00116Q8NCU8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
LINC00116Q8NCU8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.56■■■□□ 2.48
LINC00116Q8NCU8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.56■■■□□ 2.48
LINC00116Q8NCU8 AC139426.1-201ENST00000568218 2529 ntBASIC30.55■■■□□ 2.48
LINC00116Q8NCU8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LINC00116Q8NCU8 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.55■■■□□ 2.48
LINC00116Q8NCU8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
LINC00116Q8NCU8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
LINC00116Q8NCU8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
LINC00116Q8NCU8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.54■■■□□ 2.48
LINC00116Q8NCU8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.54■■■□□ 2.48
LINC00116Q8NCU8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
LINC00116Q8NCU8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LINC00116Q8NCU8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
LINC00116Q8NCU8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
LINC00116Q8NCU8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
LINC00116Q8NCU8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
LINC00116Q8NCU8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
LINC00116Q8NCU8 ZNRF2P3-201ENST00000424200 374 ntBASIC30.52■■■□□ 2.48
LINC00116Q8NCU8 AF131216.4-201ENST00000638924 1588 ntBASIC30.52■■■□□ 2.48
LINC00116Q8NCU8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.51■■■□□ 2.47
LINC00116Q8NCU8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
LINC00116Q8NCU8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.51■■■□□ 2.47
LINC00116Q8NCU8 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.51■■■□□ 2.47
LINC00116Q8NCU8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
LINC00116Q8NCU8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.5■■■□□ 2.47
LINC00116Q8NCU8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
LINC00116Q8NCU8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.49■■■□□ 2.47
LINC00116Q8NCU8 AP004609.3-201ENST00000610705 1884 ntBASIC30.49■■■□□ 2.47
LINC00116Q8NCU8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
LINC00116Q8NCU8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.49■■■□□ 2.47
LINC00116Q8NCU8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.49■■■□□ 2.47
LINC00116Q8NCU8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
LINC00116Q8NCU8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
LINC00116Q8NCU8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
LINC00116Q8NCU8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.48■■■□□ 2.47
LINC00116Q8NCU8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.48■■■□□ 2.47
LINC00116Q8NCU8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LINC00116Q8NCU8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
LINC00116Q8NCU8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.47■■■□□ 2.47
LINC00116Q8NCU8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
LINC00116Q8NCU8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LINC00116Q8NCU8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.46■■■□□ 2.47
LINC00116Q8NCU8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms