Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC36.28■■■■□ 3.4
AFAP1Q8N556 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
AFAP1Q8N556 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
AFAP1Q8N556 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC36.27■■■■□ 3.4
AFAP1Q8N556 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
AFAP1Q8N556 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
AFAP1Q8N556 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC36.26■■■■□ 3.4
AFAP1Q8N556 DRD5P2-201ENST00000421395 2012 ntBASIC36.26■■■■□ 3.4
AFAP1Q8N556 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
AFAP1Q8N556 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
AFAP1Q8N556 TK2-202ENST00000417693 1046 ntTSL 2 BASIC36.26■■■■□ 3.4
AFAP1Q8N556 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC36.26■■■■□ 3.4
AFAP1Q8N556 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC36.25■■■■□ 3.39
AFAP1Q8N556 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
AFAP1Q8N556 EBPL-204ENST00000378272 766 ntTSL 3 BASIC36.25■■■■□ 3.39
AFAP1Q8N556 GUK1-205ENST00000366722 850 ntTSL 3 BASIC36.24■■■■□ 3.39
AFAP1Q8N556 GAK-223ENST00000628912 497 ntTSL 5 BASIC36.24■■■■□ 3.39
AFAP1Q8N556 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC36.24■■■■□ 3.39
AFAP1Q8N556 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
AFAP1Q8N556 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
AFAP1Q8N556 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC36.23■■■■□ 3.39
AFAP1Q8N556 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
AFAP1Q8N556 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC36.22■■■■□ 3.39
AFAP1Q8N556 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC36.22■■■■□ 3.39
AFAP1Q8N556 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC36.22■■■■□ 3.39
AFAP1Q8N556 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC36.22■■■■□ 3.39
AFAP1Q8N556 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
AFAP1Q8N556 LINC01003-201ENST00000564834 1764 ntBASIC36.21■■■■□ 3.39
AFAP1Q8N556 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC36.2■■■■□ 3.39
AFAP1Q8N556 RARRES2P6-201ENST00000567333 442 ntBASIC36.2■■■■□ 3.39
AFAP1Q8N556 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC36.19■■■■□ 3.38
AFAP1Q8N556 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC36.19■■■■□ 3.38
AFAP1Q8N556 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC36.19■■■■□ 3.38
AFAP1Q8N556 CLTA-210ENST00000540080 989 ntTSL 2 BASIC36.19■■■■□ 3.38
AFAP1Q8N556 AC092666.2-201ENST00000613287 246 ntBASIC36.19■■■■□ 3.38
AFAP1Q8N556 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC36.18■■■■□ 3.38
AFAP1Q8N556 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
AFAP1Q8N556 AK3-203ENST00000447596 705 ntTSL 2 BASIC36.18■■■■□ 3.38
AFAP1Q8N556 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
AFAP1Q8N556 AC011551.1-201ENST00000614101 683 ntBASIC36.18■■■■□ 3.38
AFAP1Q8N556 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
AFAP1Q8N556 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
AFAP1Q8N556 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC36.18■■■■□ 3.38
AFAP1Q8N556 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC36.17■■■■□ 3.38
AFAP1Q8N556 AC142472.1-201ENST00000612013 1741 ntBASIC36.17■■■■□ 3.38
AFAP1Q8N556 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC36.17■■■■□ 3.38
AFAP1Q8N556 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
AFAP1Q8N556 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC36.16■■■■□ 3.38
AFAP1Q8N556 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
AFAP1Q8N556 AC026271.2-201ENST00000428091 497 ntBASIC36.14■■■■□ 3.38
AFAP1Q8N556 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC36.14■■■■□ 3.38
AFAP1Q8N556 AC106739.1-201ENST00000617035 715 ntBASIC36.14■■■■□ 3.38
AFAP1Q8N556 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
AFAP1Q8N556 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
AFAP1Q8N556 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
AFAP1Q8N556 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
AFAP1Q8N556 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
AFAP1Q8N556 CD72-202ENST00000378430 585 ntTSL 3 BASIC36.13■■■■□ 3.37
AFAP1Q8N556 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
AFAP1Q8N556 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC36.13■■■■□ 3.37
AFAP1Q8N556 AF131216.4-201ENST00000638924 1588 ntBASIC36.13■■■■□ 3.37
AFAP1Q8N556 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
AFAP1Q8N556 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC36.12■■■■□ 3.37
AFAP1Q8N556 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
AFAP1Q8N556 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
AFAP1Q8N556 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC36.12■■■■□ 3.37
AFAP1Q8N556 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
AFAP1Q8N556 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC36.12■■■■□ 3.37
AFAP1Q8N556 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC36.12■■■■□ 3.37
AFAP1Q8N556 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC36.11■■■■□ 3.37
AFAP1Q8N556 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
AFAP1Q8N556 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC36.11■■■■□ 3.37
AFAP1Q8N556 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
AFAP1Q8N556 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC36.1■■■■□ 3.37
AFAP1Q8N556 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC36.1■■■■□ 3.37
AFAP1Q8N556 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
AFAP1Q8N556 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
AFAP1Q8N556 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC36.1■■■■□ 3.37
AFAP1Q8N556 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC36.1■■■■□ 3.37
AFAP1Q8N556 PBX2P1-201ENST00000493219 1291 ntBASIC36.09■■■■□ 3.37
AFAP1Q8N556 AL031432.3-201ENST00000607698 485 ntBASIC36.09■■■■□ 3.37
AFAP1Q8N556 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
AFAP1Q8N556 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC36.08■■■■□ 3.37
AFAP1Q8N556 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
AFAP1Q8N556 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
AFAP1Q8N556 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC36.08■■■■□ 3.37
AFAP1Q8N556 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
AFAP1Q8N556 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC36.08■■■■□ 3.37
AFAP1Q8N556 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
AFAP1Q8N556 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC36.08■■■■□ 3.37
AFAP1Q8N556 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC36.08■■■■□ 3.37
AFAP1Q8N556 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC36.08■■■■□ 3.37
AFAP1Q8N556 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC36.08■■■■□ 3.37
AFAP1Q8N556 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC36.07■■■■□ 3.36
AFAP1Q8N556 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC36.06■■■■□ 3.36
AFAP1Q8N556 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC36.06■■■■□ 3.36
AFAP1Q8N556 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
AFAP1Q8N556 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
AFAP1Q8N556 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
AFAP1Q8N556 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC36.05■■■■□ 3.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms