Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEFF1Q8IYR6 AC142472.1-201ENST00000612013 1741 ntBASIC23.81■■□□□ 1.4
TMEFF1Q8IYR6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TMEFF1Q8IYR6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TMEFF1Q8IYR6 AL136116.3-201ENST00000402907 1138 ntBASIC23.81■■□□□ 1.4
TMEFF1Q8IYR6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEFF1Q8IYR6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEFF1Q8IYR6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEFF1Q8IYR6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEFF1Q8IYR6 AC142086.6-201ENST00000621154 1765 ntBASIC23.8■■□□□ 1.4
TMEFF1Q8IYR6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEFF1Q8IYR6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEFF1Q8IYR6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.79■■□□□ 1.4
TMEFF1Q8IYR6 AC010997.5-201ENST00000609182 354 ntBASIC23.79■■□□□ 1.4
TMEFF1Q8IYR6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEFF1Q8IYR6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TMEFF1Q8IYR6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
TMEFF1Q8IYR6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEFF1Q8IYR6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEFF1Q8IYR6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.78■■□□□ 1.4
TMEFF1Q8IYR6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TMEFF1Q8IYR6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.78■■□□□ 1.4
TMEFF1Q8IYR6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TMEFF1Q8IYR6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TMEFF1Q8IYR6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.77■■□□□ 1.4
TMEFF1Q8IYR6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.77■■□□□ 1.4
TMEFF1Q8IYR6 AL117332.1-201ENST00000622628 974 ntBASIC23.77■■□□□ 1.4
TMEFF1Q8IYR6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TMEFF1Q8IYR6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEFF1Q8IYR6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEFF1Q8IYR6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEFF1Q8IYR6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEFF1Q8IYR6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
TMEFF1Q8IYR6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TMEFF1Q8IYR6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEFF1Q8IYR6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.75■■□□□ 1.39
TMEFF1Q8IYR6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TMEFF1Q8IYR6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.74■■□□□ 1.39
TMEFF1Q8IYR6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.74■■□□□ 1.39
TMEFF1Q8IYR6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.74■■□□□ 1.39
TMEFF1Q8IYR6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.74■■□□□ 1.39
TMEFF1Q8IYR6 MTDHP2-201ENST00000601468 714 ntBASIC23.74■■□□□ 1.39
TMEFF1Q8IYR6 AP004609.3-201ENST00000610705 1884 ntBASIC23.74■■□□□ 1.39
TMEFF1Q8IYR6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TMEFF1Q8IYR6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 MIR6724-1-201ENST00000616420 92 ntBASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 MIR6724-2-201ENST00000616483 92 ntBASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 MIR6724-4-201ENST00000617390 92 ntBASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 MIR6724-3-201ENST00000622482 92 ntBASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TMEFF1Q8IYR6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEFF1Q8IYR6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
TMEFF1Q8IYR6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
TMEFF1Q8IYR6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.72■■□□□ 1.39
TMEFF1Q8IYR6 MIR3621-201ENST00000580529 85 ntBASIC23.72■■□□□ 1.39
TMEFF1Q8IYR6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEFF1Q8IYR6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TMEFF1Q8IYR6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.72■■□□□ 1.39
TMEFF1Q8IYR6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEFF1Q8IYR6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.71■■□□□ 1.39
TMEFF1Q8IYR6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TMEFF1Q8IYR6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.71■■□□□ 1.39
TMEFF1Q8IYR6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.71■■□□□ 1.39
TMEFF1Q8IYR6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.71■■□□□ 1.39
TMEFF1Q8IYR6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEFF1Q8IYR6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.7■■□□□ 1.39
TMEFF1Q8IYR6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
TMEFF1Q8IYR6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.7■■□□□ 1.38
TMEFF1Q8IYR6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.7■■□□□ 1.38
TMEFF1Q8IYR6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.7■■□□□ 1.38
TMEFF1Q8IYR6 AL356740.2-201ENST00000601559 647 ntBASIC23.7■■□□□ 1.38
TMEFF1Q8IYR6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEFF1Q8IYR6 AC110285.6-201ENST00000617652 491 ntBASIC23.7■■□□□ 1.38
TMEFF1Q8IYR6 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.7■■□□□ 1.38
TMEFF1Q8IYR6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TMEFF1Q8IYR6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TMEFF1Q8IYR6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TMEFF1Q8IYR6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.69■■□□□ 1.38
TMEFF1Q8IYR6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TMEFF1Q8IYR6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TMEFF1Q8IYR6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.69■■□□□ 1.38
TMEFF1Q8IYR6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEFF1Q8IYR6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEFF1Q8IYR6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEFF1Q8IYR6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms