Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
USP31Q70CQ4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.38■■■□□ 2.77
USP31Q70CQ4 AC092028.1-203ENST00000608262 953 ntBASIC32.38■■■□□ 2.77
USP31Q70CQ4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.37■■■□□ 2.77
USP31Q70CQ4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
USP31Q70CQ4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
USP31Q70CQ4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.36■■■□□ 2.77
USP31Q70CQ4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.36■■■□□ 2.77
USP31Q70CQ4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32.36■■■□□ 2.77
USP31Q70CQ4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.36■■■□□ 2.77
USP31Q70CQ4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.35■■■□□ 2.77
USP31Q70CQ4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
USP31Q70CQ4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
USP31Q70CQ4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
USP31Q70CQ4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
USP31Q70CQ4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.33■■■□□ 2.77
USP31Q70CQ4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
USP31Q70CQ4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC32.33■■■□□ 2.77
USP31Q70CQ4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC32.33■■■□□ 2.77
USP31Q70CQ4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
USP31Q70CQ4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC32.32■■■□□ 2.77
USP31Q70CQ4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC32.32■■■□□ 2.77
USP31Q70CQ4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
USP31Q70CQ4 AC008406.3-201ENST00000620001 1374 ntBASIC32.31■■■□□ 2.76
USP31Q70CQ4 TSPY9P-201ENST00000440215 945 ntBASIC32.31■■■□□ 2.76
USP31Q70CQ4 TSPY11P-201ENST00000442607 1045 ntBASIC32.31■■■□□ 2.76
USP31Q70CQ4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
USP31Q70CQ4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC32.3■■■□□ 2.76
USP31Q70CQ4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
USP31Q70CQ4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
USP31Q70CQ4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
USP31Q70CQ4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.3■■■□□ 2.76
USP31Q70CQ4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
USP31Q70CQ4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
USP31Q70CQ4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
USP31Q70CQ4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.28■■■□□ 2.76
USP31Q70CQ4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
USP31Q70CQ4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
USP31Q70CQ4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
USP31Q70CQ4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
USP31Q70CQ4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
USP31Q70CQ4 GAK-223ENST00000628912 497 ntTSL 5 BASIC32.27■■■□□ 2.76
USP31Q70CQ4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
USP31Q70CQ4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC32.27■■■□□ 2.76
USP31Q70CQ4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
USP31Q70CQ4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.76
USP31Q70CQ4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
USP31Q70CQ4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
USP31Q70CQ4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
USP31Q70CQ4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC32.25■■■□□ 2.75
USP31Q70CQ4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC32.25■■■□□ 2.75
USP31Q70CQ4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
USP31Q70CQ4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
USP31Q70CQ4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC32.24■■■□□ 2.75
USP31Q70CQ4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC32.24■■■□□ 2.75
USP31Q70CQ4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.24■■■□□ 2.75
USP31Q70CQ4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC32.24■■■□□ 2.75
USP31Q70CQ4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
USP31Q70CQ4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
USP31Q70CQ4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC32.24■■■□□ 2.75
USP31Q70CQ4 AC131281.2-201ENST00000520478 145 ntBASIC32.23■■■□□ 2.75
USP31Q70CQ4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC32.23■■■□□ 2.75
USP31Q70CQ4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
USP31Q70CQ4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
USP31Q70CQ4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
USP31Q70CQ4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.22■■■□□ 2.75
USP31Q70CQ4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
USP31Q70CQ4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC32.22■■■□□ 2.75
USP31Q70CQ4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
USP31Q70CQ4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.21■■■□□ 2.75
USP31Q70CQ4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
USP31Q70CQ4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
USP31Q70CQ4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
USP31Q70CQ4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.21■■■□□ 2.75
USP31Q70CQ4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
USP31Q70CQ4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.2■■■□□ 2.75
USP31Q70CQ4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
USP31Q70CQ4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.2■■■□□ 2.74
USP31Q70CQ4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC32.19■■■□□ 2.74
USP31Q70CQ4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.19■■■□□ 2.74
USP31Q70CQ4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.19■■■□□ 2.74
USP31Q70CQ4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC32.19■■■□□ 2.74
USP31Q70CQ4 AL117332.1-201ENST00000622628 974 ntBASIC32.19■■■□□ 2.74
USP31Q70CQ4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.19■■■□□ 2.74
USP31Q70CQ4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.19■■■□□ 2.74
USP31Q70CQ4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC32.19■■■□□ 2.74
USP31Q70CQ4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
USP31Q70CQ4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
USP31Q70CQ4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.18■■■□□ 2.74
USP31Q70CQ4 AF131216.4-201ENST00000638924 1588 ntBASIC32.18■■■□□ 2.74
USP31Q70CQ4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
USP31Q70CQ4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
USP31Q70CQ4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
USP31Q70CQ4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC32.18■■■□□ 2.74
USP31Q70CQ4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC32.17■■■□□ 2.74
USP31Q70CQ4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.17■■■□□ 2.74
USP31Q70CQ4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
USP31Q70CQ4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC32.17■■■□□ 2.74
USP31Q70CQ4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
USP31Q70CQ4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms