Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.59■□□□□ 0.89
SNAI3Q3KNW1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAI3Q3KNW1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNAI3Q3KNW1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SNAI3Q3KNW1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAI3Q3KNW1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.59■□□□□ 0.89
SNAI3Q3KNW1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAI3Q3KNW1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAI3Q3KNW1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SNAI3Q3KNW1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNAI3Q3KNW1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SNAI3Q3KNW1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNAI3Q3KNW1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNAI3Q3KNW1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SNAI3Q3KNW1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNAI3Q3KNW1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNAI3Q3KNW1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.57■□□□□ 0.88
SNAI3Q3KNW1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 AL592293.1-201ENST00000502889 1188 ntBASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI3Q3KNW1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNAI3Q3KNW1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNAI3Q3KNW1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SNAI3Q3KNW1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SNAI3Q3KNW1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNAI3Q3KNW1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI3Q3KNW1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNAI3Q3KNW1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNAI3Q3KNW1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNAI3Q3KNW1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SNAI3Q3KNW1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SNAI3Q3KNW1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.53■□□□□ 0.88
SNAI3Q3KNW1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNAI3Q3KNW1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.53■□□□□ 0.88
SNAI3Q3KNW1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNAI3Q3KNW1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNAI3Q3KNW1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SNAI3Q3KNW1 SPCS2P3-201ENST00000500401 656 ntBASIC20.52■□□□□ 0.88
SNAI3Q3KNW1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SNAI3Q3KNW1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.52■□□□□ 0.88
SNAI3Q3KNW1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNAI3Q3KNW1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNAI3Q3KNW1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNAI3Q3KNW1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNAI3Q3KNW1 U85056.1-201ENST00000616429 682 ntBASIC20.51■□□□□ 0.87
SNAI3Q3KNW1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNAI3Q3KNW1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNAI3Q3KNW1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.5■□□□□ 0.87
SNAI3Q3KNW1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAI3Q3KNW1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SNAI3Q3KNW1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAI3Q3KNW1 AL139125.2-201ENST00000623134 1869 ntBASIC20.5■□□□□ 0.87
SNAI3Q3KNW1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAI3Q3KNW1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAI3Q3KNW1 KRT18P10-201ENST00000388836 1287 ntBASIC20.48■□□□□ 0.87
SNAI3Q3KNW1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAI3Q3KNW1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.48■□□□□ 0.87
SNAI3Q3KNW1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms