Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PDE1AP54750 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
PDE1AP54750 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PDE1AP54750 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.11■■■□□ 2.25
PDE1AP54750 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PDE1AP54750 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
PDE1AP54750 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
PDE1AP54750 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
PDE1AP54750 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
PDE1AP54750 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PDE1AP54750 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PDE1AP54750 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.09■■■□□ 2.25
PDE1AP54750 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PDE1AP54750 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
PDE1AP54750 KRT18P60-201ENST00000312876 1297 ntBASIC29.09■■■□□ 2.25
PDE1AP54750 ABHD17AP5-201ENST00000580133 923 ntBASIC29.09■■■□□ 2.25
PDE1AP54750 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PDE1AP54750 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.09■■■□□ 2.25
PDE1AP54750 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 DUX4L9-201ENST00000449051 1259 ntBASIC29.08■■■□□ 2.25
PDE1AP54750 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
PDE1AP54750 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PDE1AP54750 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PDE1AP54750 KRT18P10-201ENST00000388836 1287 ntBASIC29.07■■■□□ 2.24
PDE1AP54750 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
PDE1AP54750 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
PDE1AP54750 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC29.07■■■□□ 2.24
PDE1AP54750 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.07■■■□□ 2.24
PDE1AP54750 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
PDE1AP54750 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PDE1AP54750 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PDE1AP54750 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PDE1AP54750 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
PDE1AP54750 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
PDE1AP54750 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PDE1AP54750 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
PDE1AP54750 AC129492.7-201ENST00000622992 756 ntBASIC29.05■■■□□ 2.24
PDE1AP54750 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PDE1AP54750 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.05■■■□□ 2.24
PDE1AP54750 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PDE1AP54750 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
PDE1AP54750 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PDE1AP54750 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.04■■■□□ 2.24
PDE1AP54750 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PDE1AP54750 AC018755.3-202ENST00000596210 929 ntBASIC29.04■■■□□ 2.24
PDE1AP54750 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.04■■■□□ 2.24
PDE1AP54750 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.04■■■□□ 2.24
PDE1AP54750 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.04■■■□□ 2.24
PDE1AP54750 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
PDE1AP54750 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PDE1AP54750 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
PDE1AP54750 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.03■■■□□ 2.24
PDE1AP54750 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PDE1AP54750 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
PDE1AP54750 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PDE1AP54750 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PDE1AP54750 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.02■■■□□ 2.24
PDE1AP54750 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PDE1AP54750 RPS2P7-201ENST00000447334 885 ntBASIC29.01■■■□□ 2.23
PDE1AP54750 NTF6A-201ENST00000591175 560 ntBASIC29.01■■■□□ 2.23
PDE1AP54750 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PDE1AP54750 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
PDE1AP54750 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
PDE1AP54750 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
PDE1AP54750 MIR6765-201ENST00000614092 87 ntBASIC29■■■□□ 2.23
PDE1AP54750 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PDE1AP54750 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.99■■■□□ 2.23
PDE1AP54750 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PDE1AP54750 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.99■■■□□ 2.23
PDE1AP54750 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.99■■■□□ 2.23
PDE1AP54750 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
PDE1AP54750 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
PDE1AP54750 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
PDE1AP54750 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
PDE1AP54750 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
PDE1AP54750 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
PDE1AP54750 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
PDE1AP54750 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.97■■■□□ 2.23
PDE1AP54750 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.96■■■□□ 2.23
PDE1AP54750 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PDE1AP54750 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.96■■■□□ 2.23
PDE1AP54750 AC087393.1-201ENST00000582896 145 ntBASIC28.96■■■□□ 2.23
PDE1AP54750 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PDE1AP54750 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
PDE1AP54750 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.96■■■□□ 2.23
PDE1AP54750 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
PDE1AP54750 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.95■■■□□ 2.23
PDE1AP54750 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PDE1AP54750 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
PDE1AP54750 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PDE1AP54750 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
PDE1AP54750 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
PDE1AP54750 FOXO3B-201ENST00000395675 1928 ntBASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms