Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC6A12P48065 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SLC6A12P48065 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SLC6A12P48065 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
SLC6A12P48065 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SLC6A12P48065 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.01■■□□□ 1.27
SLC6A12P48065 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SLC6A12P48065 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SLC6A12P48065 SPCS2P3-201ENST00000500401 656 ntBASIC23.01■■□□□ 1.27
SLC6A12P48065 U85056.1-201ENST00000616429 682 ntBASIC23.01■■□□□ 1.27
SLC6A12P48065 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.01■■□□□ 1.27
SLC6A12P48065 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC6A12P48065 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SLC6A12P48065 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SLC6A12P48065 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC6A12P48065 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SLC6A12P48065 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
SLC6A12P48065 AC135731.1-201ENST00000569415 2548 ntBASIC23■■□□□ 1.27
SLC6A12P48065 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23■■□□□ 1.27
SLC6A12P48065 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC6A12P48065 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23■■□□□ 1.27
SLC6A12P48065 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC6A12P48065 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23■■□□□ 1.27
SLC6A12P48065 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC6A12P48065 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC6A12P48065 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SLC6A12P48065 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC6A12P48065 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.99■■□□□ 1.27
SLC6A12P48065 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC6A12P48065 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SLC6A12P48065 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SLC6A12P48065 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SLC6A12P48065 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.98■■□□□ 1.27
SLC6A12P48065 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SLC6A12P48065 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SLC6A12P48065 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SLC6A12P48065 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SLC6A12P48065 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SLC6A12P48065 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.97■■□□□ 1.27
SLC6A12P48065 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SLC6A12P48065 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
SLC6A12P48065 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.97■■□□□ 1.27
SLC6A12P48065 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SLC6A12P48065 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SLC6A12P48065 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SLC6A12P48065 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SLC6A12P48065 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
SLC6A12P48065 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
SLC6A12P48065 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SLC6A12P48065 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SLC6A12P48065 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SLC6A12P48065 DUX4L9-201ENST00000449051 1259 ntBASIC22.94■■□□□ 1.26
SLC6A12P48065 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.94■■□□□ 1.26
SLC6A12P48065 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SLC6A12P48065 AC018755.3-202ENST00000596210 929 ntBASIC22.94■■□□□ 1.26
SLC6A12P48065 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SLC6A12P48065 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SLC6A12P48065 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SLC6A12P48065 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
SLC6A12P48065 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.93■■□□□ 1.26
SLC6A12P48065 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SLC6A12P48065 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.93■■□□□ 1.26
SLC6A12P48065 ABHD17AP5-201ENST00000580133 923 ntBASIC22.93■■□□□ 1.26
SLC6A12P48065 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
SLC6A12P48065 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.92■■□□□ 1.26
SLC6A12P48065 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.92■■□□□ 1.26
SLC6A12P48065 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SLC6A12P48065 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SLC6A12P48065 KRT18P60-201ENST00000312876 1297 ntBASIC22.92■■□□□ 1.26
SLC6A12P48065 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.92■■□□□ 1.26
SLC6A12P48065 RPS2P7-201ENST00000447334 885 ntBASIC22.92■■□□□ 1.26
SLC6A12P48065 AP003733.4-201ENST00000623785 1697 ntBASIC22.92■■□□□ 1.26
SLC6A12P48065 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SLC6A12P48065 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC6A12P48065 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
SLC6A12P48065 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
SLC6A12P48065 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC6A12P48065 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SLC6A12P48065 AC129492.7-201ENST00000622992 756 ntBASIC22.91■■□□□ 1.26
SLC6A12P48065 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC6A12P48065 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC6A12P48065 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.9■■□□□ 1.26
SLC6A12P48065 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.9■■□□□ 1.26
SLC6A12P48065 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SLC6A12P48065 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.9■■□□□ 1.26
SLC6A12P48065 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
SLC6A12P48065 MIR6089-201ENST00000616698 64 ntBASIC22.9■■□□□ 1.26
SLC6A12P48065 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SLC6A12P48065 AL139125.2-201ENST00000623134 1869 ntBASIC22.9■■□□□ 1.26
SLC6A12P48065 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC6A12P48065 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SLC6A12P48065 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
SLC6A12P48065 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SLC6A12P48065 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SLC6A12P48065 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
SLC6A12P48065 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SLC6A12P48065 MIR6765-201ENST00000614092 87 ntBASIC22.89■■□□□ 1.25
SLC6A12P48065 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SLC6A12P48065 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.89■■□□□ 1.25
SLC6A12P48065 FOXO3B-201ENST00000395675 1928 ntBASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms