Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL15A1P39059 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.52■■■□□ 2.48
COL15A1P39059 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COL15A1P39059 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.51■■■□□ 2.47
COL15A1P39059 AP004609.3-201ENST00000610705 1884 ntBASIC30.51■■■□□ 2.47
COL15A1P39059 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
COL15A1P39059 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL15A1P39059 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL15A1P39059 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.5■■■□□ 2.47
COL15A1P39059 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL15A1P39059 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL15A1P39059 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.5■■■□□ 2.47
COL15A1P39059 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
COL15A1P39059 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.49■■■□□ 2.47
COL15A1P39059 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL15A1P39059 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.49■■■□□ 2.47
COL15A1P39059 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.48■■■□□ 2.47
COL15A1P39059 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
COL15A1P39059 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.48■■■□□ 2.47
COL15A1P39059 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
COL15A1P39059 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
COL15A1P39059 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.47■■■□□ 2.47
COL15A1P39059 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL15A1P39059 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL15A1P39059 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.47■■■□□ 2.47
COL15A1P39059 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.47■■■□□ 2.47
COL15A1P39059 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.47■■■□□ 2.47
COL15A1P39059 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL15A1P39059 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
COL15A1P39059 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL15A1P39059 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL15A1P39059 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL15A1P39059 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.45■■■□□ 2.47
COL15A1P39059 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
COL15A1P39059 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.44■■■□□ 2.46
COL15A1P39059 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
COL15A1P39059 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
COL15A1P39059 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
COL15A1P39059 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.44■■■□□ 2.46
COL15A1P39059 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL15A1P39059 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.43■■■□□ 2.46
COL15A1P39059 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.43■■■□□ 2.46
COL15A1P39059 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
COL15A1P39059 AL117332.1-201ENST00000622628 974 ntBASIC30.43■■■□□ 2.46
COL15A1P39059 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL15A1P39059 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL15A1P39059 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
COL15A1P39059 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
COL15A1P39059 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.42■■■□□ 2.46
COL15A1P39059 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.42■■■□□ 2.46
COL15A1P39059 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.42■■■□□ 2.46
COL15A1P39059 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
COL15A1P39059 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL15A1P39059 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.41■■■□□ 2.46
COL15A1P39059 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
COL15A1P39059 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
COL15A1P39059 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.41■■■□□ 2.46
COL15A1P39059 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL15A1P39059 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL15A1P39059 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL15A1P39059 AL139246.5-201ENST00000606645 996 ntBASIC30.41■■■□□ 2.46
COL15A1P39059 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL15A1P39059 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
COL15A1P39059 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL15A1P39059 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL15A1P39059 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.4■■■□□ 2.46
COL15A1P39059 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.4■■■□□ 2.46
COL15A1P39059 AC011551.1-201ENST00000614101 683 ntBASIC30.4■■■□□ 2.46
COL15A1P39059 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.4■■■□□ 2.46
COL15A1P39059 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
COL15A1P39059 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.39■■■□□ 2.46
COL15A1P39059 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL15A1P39059 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.38■■■□□ 2.45
COL15A1P39059 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.38■■■□□ 2.45
COL15A1P39059 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
COL15A1P39059 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
COL15A1P39059 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
COL15A1P39059 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL15A1P39059 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.37■■■□□ 2.45
COL15A1P39059 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL15A1P39059 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.37■■■□□ 2.45
COL15A1P39059 AL136116.3-201ENST00000402907 1138 ntBASIC30.37■■■□□ 2.45
COL15A1P39059 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.37■■■□□ 2.45
COL15A1P39059 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.37■■■□□ 2.45
COL15A1P39059 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.37■■■□□ 2.45
COL15A1P39059 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL15A1P39059 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL15A1P39059 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
COL15A1P39059 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
COL15A1P39059 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
COL15A1P39059 AC010997.5-201ENST00000609182 354 ntBASIC30.36■■■□□ 2.45
COL15A1P39059 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.36■■■□□ 2.45
COL15A1P39059 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
COL15A1P39059 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
COL15A1P39059 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
COL15A1P39059 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.35■■■□□ 2.45
COL15A1P39059 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
COL15A1P39059 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
COL15A1P39059 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.35■■■□□ 2.45
COL15A1P39059 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms