Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SNAI2O43623 AP003733.4-201ENST00000623785 1697 ntBASIC17.55■□□□□ 0.4
SNAI2O43623 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAI2O43623 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAI2O43623 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.55■□□□□ 0.4
SNAI2O43623 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAI2O43623 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAI2O43623 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.55■□□□□ 0.4
SNAI2O43623 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAI2O43623 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAI2O43623 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAI2O43623 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAI2O43623 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.54■□□□□ 0.4
SNAI2O43623 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAI2O43623 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.54■□□□□ 0.4
SNAI2O43623 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAI2O43623 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.54■□□□□ 0.4
SNAI2O43623 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.54■□□□□ 0.4
SNAI2O43623 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SNAI2O43623 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAI2O43623 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAI2O43623 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNAI2O43623 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNAI2O43623 AC079834.2-201ENST00000609776 1949 ntBASIC17.53■□□□□ 0.4
SNAI2O43623 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.53■□□□□ 0.4
SNAI2O43623 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAI2O43623 AC008813.1-201ENST00000536597 885 ntBASIC17.53■□□□□ 0.4
SNAI2O43623 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SNAI2O43623 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNAI2O43623 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNAI2O43623 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNAI2O43623 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAI2O43623 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAI2O43623 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNAI2O43623 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNAI2O43623 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.52■□□□□ 0.4
SNAI2O43623 AC148477.6-201ENST00000623746 465 ntBASIC17.52■□□□□ 0.4
SNAI2O43623 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.52■□□□□ 0.4
SNAI2O43623 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAI2O43623 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNAI2O43623 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNAI2O43623 LINC00543-201ENST00000567234 1845 ntBASIC17.51■□□□□ 0.39
SNAI2O43623 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAI2O43623 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAI2O43623 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.51■□□□□ 0.39
SNAI2O43623 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNAI2O43623 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAI2O43623 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAI2O43623 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SNAI2O43623 MIR219A2-201ENST00000608502 1504 ntBASIC17.51■□□□□ 0.39
SNAI2O43623 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SNAI2O43623 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAI2O43623 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.51■□□□□ 0.39
SNAI2O43623 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNAI2O43623 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAI2O43623 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.5■□□□□ 0.39
SNAI2O43623 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SNAI2O43623 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAI2O43623 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNAI2O43623 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAI2O43623 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAI2O43623 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNAI2O43623 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNAI2O43623 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.49■□□□□ 0.39
SNAI2O43623 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.49■□□□□ 0.39
SNAI2O43623 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 LINC01124-201ENST00000409786 2117 ntBASIC17.49■□□□□ 0.39
SNAI2O43623 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 AL359504.2-201ENST00000605506 1601 ntBASIC17.49■□□□□ 0.39
SNAI2O43623 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNAI2O43623 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNAI2O43623 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNAI2O43623 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNAI2O43623 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SNAI2O43623 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SNAI2O43623 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SNAI2O43623 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
SNAI2O43623 AC068473.5-201ENST00000616428 2072 ntBASIC17.47■□□□□ 0.39
SNAI2O43623 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNAI2O43623 AC097639.1-201ENST00000565519 1891 ntBASIC17.46■□□□□ 0.39
SNAI2O43623 AL359258.2-201ENST00000564063 1566 ntBASIC17.46■□□□□ 0.39
SNAI2O43623 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNAI2O43623 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNAI2O43623 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.46■□□□□ 0.39
SNAI2O43623 LINC01971-201ENST00000617888 1048 ntBASIC17.46■□□□□ 0.39
SNAI2O43623 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms