Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TNRC18O15417 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TNRC18O15417 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNRC18O15417 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNRC18O15417 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNRC18O15417 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
TNRC18O15417 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
TNRC18O15417 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
TNRC18O15417 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TNRC18O15417 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
TNRC18O15417 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TNRC18O15417 IRS3P-201ENST00000223076 1006 ntBASIC26.7■■□□□ 1.86
TNRC18O15417 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
TNRC18O15417 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
TNRC18O15417 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
TNRC18O15417 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
TNRC18O15417 CA15P2-201ENST00000611168 834 ntBASIC26.69■■□□□ 1.86
TNRC18O15417 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.68■■□□□ 1.86
TNRC18O15417 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.68■■□□□ 1.86
TNRC18O15417 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TNRC18O15417 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
TNRC18O15417 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TNRC18O15417 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TNRC18O15417 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TNRC18O15417 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.66■■□□□ 1.86
TNRC18O15417 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.66■■□□□ 1.86
TNRC18O15417 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.66■■□□□ 1.86
TNRC18O15417 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
TNRC18O15417 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TNRC18O15417 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
TNRC18O15417 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.66■■□□□ 1.86
TNRC18O15417 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.66■■□□□ 1.86
TNRC18O15417 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.66■■□□□ 1.86
TNRC18O15417 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.66■■□□□ 1.86
TNRC18O15417 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TNRC18O15417 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNRC18O15417 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.65■■□□□ 1.86
TNRC18O15417 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.65■■□□□ 1.86
TNRC18O15417 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TNRC18O15417 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TNRC18O15417 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.65■■□□□ 1.86
TNRC18O15417 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNRC18O15417 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.65■■□□□ 1.86
TNRC18O15417 AL031602.1-201ENST00000633169 911 ntBASIC26.65■■□□□ 1.86
TNRC18O15417 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNRC18O15417 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TNRC18O15417 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.64■■□□□ 1.85
TNRC18O15417 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TNRC18O15417 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TNRC18O15417 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TNRC18O15417 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.63■■□□□ 1.85
TNRC18O15417 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TNRC18O15417 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
TNRC18O15417 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
TNRC18O15417 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TNRC18O15417 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TNRC18O15417 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
TNRC18O15417 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.62■■□□□ 1.85
TNRC18O15417 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TNRC18O15417 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TNRC18O15417 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.61■■□□□ 1.85
TNRC18O15417 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.61■■□□□ 1.85
TNRC18O15417 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.61■■□□□ 1.85
TNRC18O15417 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TNRC18O15417 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TNRC18O15417 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.6■■□□□ 1.85
TNRC18O15417 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TNRC18O15417 AL135925.1-201ENST00000605920 1701 ntBASIC26.6■■□□□ 1.85
TNRC18O15417 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TNRC18O15417 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TNRC18O15417 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.59■■□□□ 1.85
TNRC18O15417 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.59■■□□□ 1.85
TNRC18O15417 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TNRC18O15417 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.59■■□□□ 1.85
TNRC18O15417 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.59■■□□□ 1.85
TNRC18O15417 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TNRC18O15417 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.58■■□□□ 1.85
TNRC18O15417 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
TNRC18O15417 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.58■■□□□ 1.84
TNRC18O15417 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
TNRC18O15417 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.57■■□□□ 1.84
TNRC18O15417 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TNRC18O15417 AC027682.1-201ENST00000562846 899 ntBASIC26.57■■□□□ 1.84
TNRC18O15417 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.57■■□□□ 1.84
TNRC18O15417 RAP2CP1-201ENST00000605103 478 ntBASIC26.57■■□□□ 1.84
TNRC18O15417 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TNRC18O15417 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
TNRC18O15417 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.56■■□□□ 1.84
TNRC18O15417 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TNRC18O15417 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.55■■□□□ 1.84
TNRC18O15417 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TNRC18O15417 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.55■■□□□ 1.84
TNRC18O15417 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
TNRC18O15417 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
TNRC18O15417 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TNRC18O15417 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TNRC18O15417 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TNRC18O15417 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
TNRC18O15417 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.53■■□□□ 1.84
TNRC18O15417 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms