Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.178e-9■□□□□ 8.4
NCBP2P52298 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.88e-9■□□□□ 8.4
NCBP2P52298 PAPOLA-221ENST00000556619 584 ntTSL 33.02□□□□□ -1.931e-12■□□□□ 8.4
NCBP2P52298 DHX33-204ENST00000574023 2040 ntTSL 1 (best)17.98■□□□□ 0.473e-6■□□□□ 8.4
NCBP2P52298 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.263e-6■□□□□ 8.4
NCBP2P52298 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.61■□□□□ 0.253e-6■□□□□ 8.4
NCBP2P52298 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.593e-10■□□□□ 8.4
NCBP2P52298 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.953e-16■□□□□ 8.4
NCBP2P52298 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.953e-16■□□□□ 8.4
NCBP2P52298 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.523e-13■□□□□ 8.3
NCBP2P52298 EXOC7-217ENST00000589507 820 ntTSL 516.05■□□□□ 0.162e-16■□□□□ 8.3
NCBP2P52298 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.452e-16■□□□□ 8.3
NCBP2P52298 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC11.86□□□□□ -0.512e-16■□□□□ 8.3
NCBP2P52298 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.522e-16■□□□□ 8.3
NCBP2P52298 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC10.54□□□□□ -0.722e-16■□□□□ 8.3
NCBP2P52298 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.732e-16■□□□□ 8.3
NCBP2P52298 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC10.31□□□□□ -0.762e-16■□□□□ 8.3
NCBP2P52298 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC10.19□□□□□ -0.782e-16■□□□□ 8.3
NCBP2P52298 EXOC7-204ENST00000405068 2958 ntTSL 210.1□□□□□ -0.792e-16■□□□□ 8.3
NCBP2P52298 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC7.91□□□□□ -1.142e-16■□□□□ 8.3
NCBP2P52298 MYL12A-212ENST00000608786 738 nt20.03■□□□□ 0.83e-7■□□□□ 8.3
NCBP2P52298 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.383e-7■□□□□ 8.3
NCBP2P52298 MYL12A-208ENST00000580353 565 ntTSL 214.73□□□□□ -0.053e-7■□□□□ 8.3
NCBP2P52298 PLK1-204ENST00000564202 584 ntTSL 314.6□□□□□ -0.073e-7■□□□□ 8.3
NCBP2P52298 PLK1-209ENST00000570220 910 ntTSL 314.55□□□□□ -0.083e-7■□□□□ 8.3
NCBP2P52298 PLK1-202ENST00000562272 4135 ntTSL 211.46□□□□□ -0.573e-7■□□□□ 8.3
NCBP2P52298 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.773e-7■□□□□ 8.3
NCBP2P52298 MYL12A-211ENST00000585090 614 ntTSL 39.64□□□□□ -0.873e-7■□□□□ 8.3
NCBP2P52298 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.933e-7■□□□□ 8.3
NCBP2P52298 MYL12A-210ENST00000583449 334 ntTSL 29.13□□□□□ -0.953e-7■□□□□ 8.3
NCBP2P52298 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.013e-7■□□□□ 8.3
NCBP2P52298 EPS8L2-222ENST00000532545 419 ntTSL 320.6■□□□□ 0.891e-7■□□□□ 8.3
NCBP2P52298 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.31■□□□□ 0.841e-7■□□□□ 8.3
NCBP2P52298 TOP3B-205ENST00000434517 736 ntTSL 519.94■□□□□ 0.781e-7■□□□□ 8.3
NCBP2P52298 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.441e-7■□□□□ 8.3
NCBP2P52298 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.334e-14■□□□□ 8.3
NCBP2P52298 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.21e-7■□□□□ 8.3
NCBP2P52298 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.34■□□□□ 0.051e-7■□□□□ 8.3
NCBP2P52298 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.09■□□□□ 0.011e-7■□□□□ 8.3
NCBP2P52298 TOP3B-211ENST00000449704 543 ntTSL 314.56□□□□□ -0.081e-7■□□□□ 8.3
NCBP2P52298 LLGL2-214ENST00000579392 483 ntTSL 413.94□□□□□ -0.181e-7■□□□□ 8.3
NCBP2P52298 TOP3B-204ENST00000430142 582 ntTSL 213.51□□□□□ -0.251e-7■□□□□ 8.3
NCBP2P52298 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-7■□□□□ 8.3
NCBP2P52298 TOP3B-213ENST00000457179 3061 ntTSL 512.6□□□□□ -0.391e-7■□□□□ 8.3
NCBP2P52298 LLGL2-216ENST00000580578 577 ntTSL 412.59□□□□□ -0.391e-7■□□□□ 8.3
NCBP2P52298 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.431e-7■□□□□ 8.3
NCBP2P52298 TOP3B-207ENST00000437103 571 ntTSL 411.32□□□□□ -0.61e-7■□□□□ 8.3
NCBP2P52298 TOP3B-210ENST00000444502 4163 ntTSL 210.15□□□□□ -0.791e-7■□□□□ 8.3
NCBP2P52298 TOP3B-203ENST00000424393 824 ntTSL 510.09□□□□□ -0.791e-7■□□□□ 8.3
NCBP2P52298 TOP3B-212ENST00000456075 561 ntTSL 49.58□□□□□ -0.881e-7■□□□□ 8.3
NCBP2P52298 TOP3B-208ENST00000437929 550 ntTSL 46.02□□□□□ -1.451e-7■□□□□ 8.3
NCBP2P52298 RNF128-203ENST00000418562 839 ntTSL 54.35□□□□□ -1.711e-7■□□□□ 8.3
NCBP2P52298 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.62□□□□□ -1.991e-7■□□□□ 8.3
NCBP2P52298 SELENOI-204ENST00000462301 424 ntTSL 1 (best)11.94□□□□□ -0.52e-11■□□□□ 8.3
NCBP2P52298 SELENOI-203ENST00000447170 624 ntTSL 510.79□□□□□ -0.682e-11■□□□□ 8.3
NCBP2P52298 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.462e-11■□□□□ 8.3
NCBP2P52298 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.742e-11■□□□□ 8.3
NCBP2P52298 SELENOI-202ENST00000442141 504 ntTSL 52.64□□□□□ -1.992e-11■□□□□ 8.3
NCBP2P52298 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.47e-10■□□□□ 8.3
NCBP2P52298 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.47e-10■□□□□ 8.3
NCBP2P52298 ZNF706-215ENST00000523922 493 ntTSL 320.37■□□□□ 0.857e-10■□□□□ 8.3
NCBP2P52298 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.27■□□□□ 0.367e-10■□□□□ 8.3
NCBP2P52298 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.37e-10■□□□□ 8.3
NCBP2P52298 ZNF706-210ENST00000520454 488 ntTSL 316.73■□□□□ 0.277e-10■□□□□ 8.3
NCBP2P52298 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.087e-10■□□□□ 8.3
NCBP2P52298 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.397e-10■□□□□ 8.3
NCBP2P52298 ZNF706-208ENST00000519916 597 ntTSL 29.19□□□□□ -0.947e-10■□□□□ 8.3
NCBP2P52298 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.387e-10■□□□□ 8.3
NCBP2P52298 ZNF706-214ENST00000523146 476 ntTSL 51.1□□□□□ -2.237e-10■□□□□ 8.3
NCBP2P52298 POLR1B-207ENST00000430769 572 ntTSL 417.77■□□□□ 0.442e-7■□□□□ 8.3
NCBP2P52298 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.392e-7■□□□□ 8.3
NCBP2P52298 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.042e-7■□□□□ 8.3
NCBP2P52298 MRPS25-204ENST00000447299 723 ntTSL 314.54□□□□□ -0.082e-7■□□□□ 8.3
NCBP2P52298 NDUFA7-202ENST00000593729 569 ntTSL 214.25□□□□□ -0.132e-7■□□□□ 8.3
NCBP2P52298 NDUFA7-204ENST00000601101 414 ntTSL 413.86□□□□□ -0.192e-7■□□□□ 8.3
NCBP2P52298 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.44□□□□□ -0.262e-7■□□□□ 8.3
NCBP2P52298 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.312e-7■□□□□ 8.3
NCBP2P52298 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.332e-7■□□□□ 8.3
NCBP2P52298 POLR1B-209ENST00000448770 2494 ntTSL 1 (best)12.83□□□□□ -0.362e-7■□□□□ 8.3
NCBP2P52298 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.492e-7■□□□□ 8.3
NCBP2P52298 POLR1B-208ENST00000438748 555 ntTSL 411.63□□□□□ -0.552e-7■□□□□ 8.3
NCBP2P52298 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.553e-20■□□□□ 8.3
NCBP2P52298 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.3□□□□□ -0.62e-7■□□□□ 8.3
NCBP2P52298 MRPS25-202ENST00000420267 590 ntTSL 411.25□□□□□ -0.612e-7■□□□□ 8.3
NCBP2P52298 POLR1B-206ENST00000430293 595 ntTSL 411.25□□□□□ -0.612e-7■□□□□ 8.3
NCBP2P52298 POLR1B-205ENST00000424062 558 ntTSL 411.17□□□□□ -0.622e-7■□□□□ 8.3
NCBP2P52298 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.632e-7■□□□□ 8.3
NCBP2P52298 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.652e-7■□□□□ 8.3
NCBP2P52298 POLR1B-202ENST00000333990 4376 ntTSL 1 (best)10.92□□□□□ -0.662e-7■□□□□ 8.3
NCBP2P52298 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.722e-7■□□□□ 8.3
NCBP2P52298 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC10.31□□□□□ -0.763e-20■□□□□ 8.3
NCBP2P52298 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC10.02□□□□□ -0.812e-7■□□□□ 8.3
NCBP2P52298 NDUFA7-203ENST00000595856 553 ntTSL 59.09□□□□□ -0.952e-7■□□□□ 8.3
NCBP2P52298 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.85□□□□□ -0.992e-7■□□□□ 8.3
NCBP2P52298 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC8.42□□□□□ -1.062e-7■□□□□ 8.3
NCBP2P52298 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.78□□□□□ -1.162e-7■□□□□ 8.3
NCBP2P52298 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.086e-11■□□□□ 8.3
NCBP2P52298 TM9SF3-202ENST00000443638 868 ntTSL 33.89□□□□□ -1.796e-11■□□□□ 8.3
NCBP2P52298 PRPF40A-209ENST00000486100 569 ntTSL 416.82■□□□□ 0.282e-16■□□□□ 8.3
NCBP2P52298 PRPF40A-204ENST00000450303 496 ntTSL 315.7■□□□□ 0.12e-16■□□□□ 8.3
Retrieved 100 of 18,329 protein–RNA pairs in 512.3 ms