RNA–Protein interactions for RNA: ENST00000430769.1

POLR1B-207, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-207ENST00000430769 NISCHQ9Y2I1 1504 aa46.28■■■■■ 5
POLR1B-207ENST00000430769 CCDC180Q9P1Z9 1646 aa41.02■■■■■ 4.16
POLR1B-207ENST00000430769 ABCC9O60706 1549 aa40.24■■■■■ 4.03
POLR1B-207ENST00000430769 DCAF8L2P0C7V8 631 aa38.9■■■■□ 3.82
POLR1B-207ENST00000430769 RB1CC1Q8TDY2 1594 aa38.65■■■■□ 3.78
POLR1B-207ENST00000430769 NACADO15069 1562 aa38.61■■■■□ 3.77
POLR1B-207ENST00000430769 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
POLR1B-207ENST00000430769 MYO15BQ96JP2 1530 aa38.35■■■■□ 3.73
POLR1B-207ENST00000430769 DCAF1Q9Y4B6 1507 aa38.22■■■■□ 3.71
POLR1B-207ENST00000430769 UNC13AQ9UPW8 1703 aa37.73■■■■□ 3.63
POLR1B-207ENST00000430769 PABPN1Q86U42 306 aaKnown RBP eCLIP37.71■■■■□ 3.63
POLR1B-207ENST00000430769 SCRIBQ14160 1630 aa37.55■■■■□ 3.6
POLR1B-207ENST00000430769 BICRAQ9NZM4 1560 aa37.47■■■■□ 3.59
POLR1B-207ENST00000430769 SHROOM4Q9ULL8 1493 aa37■■■■□ 3.51
POLR1B-207ENST00000430769 DNAJC5BQ9UF47 199 aa36.94■■■■□ 3.5
POLR1B-207ENST00000430769 EIF4G1Q04637 1599 aaKnown RBP36.49■■■■□ 3.43
POLR1B-207ENST00000430769 CC2D2AQ9P2K1 1620 aa36.34■■■■□ 3.41
POLR1B-207ENST00000430769 CECR2Q9BXF3 1484 aa36.12■■■■□ 3.37
POLR1B-207ENST00000430769 SMARCA4P51532 1647 aa35.88■■■■□ 3.33
POLR1B-207ENST00000430769 BAZ1AQ9NRL2 1556 aaPredicted RBP35.85■■■■□ 3.33
POLR1B-207ENST00000430769 MROH2BQ7Z745 1585 aa35.71■■■■□ 3.31
POLR1B-207ENST00000430769 ATAD2BQ9ULI0 1458 aa35.7■■■■□ 3.31
POLR1B-207ENST00000430769 NCAPD3P42695 1498 aa35.66■■■■□ 3.3
POLR1B-207ENST00000430769 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
POLR1B-207ENST00000430769 PEG3Q9GZU2 1588 aa35.47■■■■□ 3.27
POLR1B-207ENST00000430769 HMGXB3Q12766 1538 aa35.43■■■■□ 3.26
POLR1B-207ENST00000430769 BAZ1BQ9UIG0 1483 aaKnown RBP35.42■■■■□ 3.26
POLR1B-207ENST00000430769 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
POLR1B-207ENST00000430769 WIZO95785 1651 aa35.32■■■■□ 3.24
POLR1B-207ENST00000430769 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
POLR1B-207ENST00000430769 NESP48681 1621 aa34.84■■■■□ 3.17
POLR1B-207ENST00000430769 ERCC6Q03468 1493 aa34.67■■■■□ 3.14
POLR1B-207ENST00000430769 CADPSQ9ULU8 1353 aa34.67■■■■□ 3.14
POLR1B-207ENST00000430769 LAMC3Q9Y6N6 1575 aa34.66■■■■□ 3.14
POLR1B-207ENST00000430769 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
POLR1B-207ENST00000430769 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
POLR1B-207ENST00000430769 PDS5BQ9NTI5 1447 aa34.5■■■■□ 3.11
POLR1B-207ENST00000430769 CFTRP13569 1480 aa34.44■■■■□ 3.1
POLR1B-207ENST00000430769 KIF21AQ7Z4S6 1674 aa34.35■■■■□ 3.09
POLR1B-207ENST00000430769 FANCD2Q9BXW9 1451 aa34.26■■■■□ 3.07
POLR1B-207ENST00000430769 CUX2O14529 1486 aa34.2■■■■□ 3.06
POLR1B-207ENST00000430769 CEP164Q9UPV0 1460 aa34.19■■■■□ 3.06
POLR1B-207ENST00000430769 THOC2Q8NI27 1593 aaKnown RBP34.19■■■■□ 3.06
POLR1B-207ENST00000430769 MRC2Q9UBG0 1479 aa34.12■■■■□ 3.05
POLR1B-207ENST00000430769 PRDM2Q13029 1718 aa34.06■■■■□ 3.04
POLR1B-207ENST00000430769 WDR62O43379 1518 aa33.96■■■■□ 3.03
POLR1B-207ENST00000430769 URB2Q14146 1524 aaKnown RBP33.9■■■■□ 3.02
POLR1B-207ENST00000430769 TOPBP1Q92547 1522 aa33.7■■■□□ 2.99
POLR1B-207ENST00000430769 ABCC8Q09428 1581 aa33.68■■■□□ 2.98
POLR1B-207ENST00000430769 DNMBPQ6XZF7 1577 aa33.64■■■□□ 2.98
POLR1B-207ENST00000430769 CUX1P39880 1505 aa33.48■■■□□ 2.95
POLR1B-207ENST00000430769 IFT140Q96RY7 1462 aa33.47■■■□□ 2.95
POLR1B-207ENST00000430769 POLA1P09884 1462 aaPredicted RBP33.42■■■□□ 2.94
POLR1B-207ENST00000430769 FGD5Q6ZNL6 1462 aa33.37■■■□□ 2.93
POLR1B-207ENST00000430769 ZNF608Q9ULD9 1512 aaPredicted RBP33.35■■■□□ 2.93
POLR1B-207ENST00000430769 SOGA1O94964 1423 aa33.35■■■□□ 2.93
POLR1B-207ENST00000430769 RAD54L2Q9Y4B4 1467 aa33.33■■■□□ 2.93
POLR1B-207ENST00000430769 WRNQ14191 1432 aaPredicted RBP eCLIP33.32■■■□□ 2.92
POLR1B-207ENST00000430769 TARBP1Q13395 1621 aaKnown RBP33.29■■■□□ 2.92
POLR1B-207ENST00000430769 AQRO60306 1485 aaKnown RBP eCLIP33.2■■■□□ 2.91
POLR1B-207ENST00000430769 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
POLR1B-207ENST00000430769 DNAJC5Q9H3Z4 198 aa33.18■■■□□ 2.9
POLR1B-207ENST00000430769 TDRD9Q8NDG6 1382 aaKnown RBP33.18■■■□□ 2.9
POLR1B-207ENST00000430769 TOP2BQ02880 1626 aa33.17■■■□□ 2.9
POLR1B-207ENST00000430769 BIVM-ERCC5R4GMW8 1640 aa33.14■■■□□ 2.9
POLR1B-207ENST00000430769 EIF4G3O43432 1585 aaKnown RBP33.14■■■□□ 2.9
POLR1B-207ENST00000430769 ABCA10Q8WWZ4 1543 aa33.02■■■□□ 2.88
POLR1B-207ENST00000430769 WDR97A6NE52 1622 aa32.98■■■□□ 2.87
POLR1B-207ENST00000430769 OSCARQ8IYS5 282 aa32.94■■■□□ 2.86
POLR1B-207ENST00000430769 GAPVD1Q14C86 1478 aa32.93■■■□□ 2.86
POLR1B-207ENST00000430769 GRIN2BQ13224 1484 aa32.9■■■□□ 2.86
POLR1B-207ENST00000430769 FBLN2P98095 1184 aa32.89■■■□□ 2.86
POLR1B-207ENST00000430769 SNAPC4Q5SXM2 1469 aa32.85■■■□□ 2.85
POLR1B-207ENST00000430769 ABCA5Q8WWZ7 1642 aa32.84■■■□□ 2.85
POLR1B-207ENST00000430769 CHMP7Q8WUX9 453 aaPredicted RBP32.77■■■□□ 2.84
POLR1B-207ENST00000430769 MAGI1Q96QZ7 1491 aaPredicted RBP32.77■■■□□ 2.84
POLR1B-207ENST00000430769 PBRM1Q86U86 1689 aa32.77■■■□□ 2.84
POLR1B-207ENST00000430769 CHD1O14646 1710 aa32.72■■■□□ 2.83
POLR1B-207ENST00000430769 TRIM41Q8WV44 630 aa32.69■■■□□ 2.82
POLR1B-207ENST00000430769 SYNJ2O15056 1496 aa32.67■■■□□ 2.82
POLR1B-207ENST00000430769 KIF27Q86VH2 1401 aa32.62■■■□□ 2.81
POLR1B-207ENST00000430769 ERICH3Q5RHP9 1530 aa32.61■■■□□ 2.81
POLR1B-207ENST00000430769 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
POLR1B-207ENST00000430769 ADAMTS12P58397 1594 aa32.53■■■□□ 2.8
POLR1B-207ENST00000430769 IGF1RP08069 1367 aa32.51■■■□□ 2.79
POLR1B-207ENST00000430769 GRIN2AQ12879 1464 aa32.46■■■□□ 2.79
POLR1B-207ENST00000430769 RUSC2Q8N2Y8 1516 aa32.39■■■□□ 2.78
POLR1B-207ENST00000430769 CLASP1Q7Z460 1538 aa32.36■■■□□ 2.77
POLR1B-207ENST00000430769 CHIC1Q5VXU3 224 aa32.33■■■□□ 2.77
POLR1B-207ENST00000430769 CARMIL1Q5VZK9 1371 aa32.32■■■□□ 2.77
POLR1B-207ENST00000430769 NUP160Q12769 1436 aa32.3■■■□□ 2.76
POLR1B-207ENST00000430769 CUL7Q14999 1698 aa32.3■■■□□ 2.76
POLR1B-207ENST00000430769 ARHGEF11O15085 1522 aa32.3■■■□□ 2.76
POLR1B-207ENST00000430769 RIMBP3CA6NJZ7 1639 aa32.29■■■□□ 2.76
POLR1B-207ENST00000430769 RIMBP3BA6NNM3 1639 aa32.29■■■□□ 2.76
POLR1B-207ENST00000430769 RIMBP3Q9UFD9 1639 aa32.29■■■□□ 2.76
POLR1B-207ENST00000430769 CEP170Q5SW79 1584 aa32.28■■■□□ 2.76
POLR1B-207ENST00000430769 CYB5RLQ6IPT4 315 aa32.14■■■□□ 2.74
POLR1B-207ENST00000430769 RAPGEF2Q9Y4G8 1499 aa32.1■■■□□ 2.73
POLR1B-207ENST00000430769 JPH4Q96JJ6 628 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms