RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
POLR1B-203ENST00000409894 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
POLR1B-203ENST00000409894 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
POLR1B-203ENST00000409894 EHMT2Q96KQ7 1210 aa14.5□□□□□ -0.09
POLR1B-203ENST00000409894 PCGF6Q9BYE7 350 aa14.43□□□□□ -0.1
POLR1B-203ENST00000409894 SHROOM4Q9ULL8 1493 aa14.36□□□□□ -0.11
POLR1B-203ENST00000409894 CENPBP07199 599 aaPredicted RBP14.27□□□□□ -0.13
POLR1B-203ENST00000409894 MYT1Q01538 1121 aa14.26□□□□□ -0.13
POLR1B-203ENST00000409894 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
POLR1B-203ENST00000409894 NISCHQ9Y2I1 1504 aa14.17□□□□□ -0.14
POLR1B-203ENST00000409894 TTBK1Q5TCY1 1321 aaPredicted RBP14.09□□□□□ -0.15
POLR1B-203ENST00000409894 FAM9AQ8IZU1 332 aaPredicted RBP14.07□□□□□ -0.16
POLR1B-203ENST00000409894 ZEB1P37275 1124 aaPredicted RBP14.04□□□□□ -0.16
POLR1B-203ENST00000409894 APLP2Q06481 763 aa14.04□□□□□ -0.16
POLR1B-203ENST00000409894 CCER1Q8TC90 406 aaPredicted RBP14.01□□□□□ -0.17
POLR1B-203ENST00000409894 YTHDC1Q96MU7 727 aaKnown RBP13.96□□□□□ -0.17
POLR1B-203ENST00000409894 NEFLP07196 543 aa13.82□□□□□ -0.2
POLR1B-203ENST00000409894 HRCP23327 699 aa13.8□□□□□ -0.2
POLR1B-203ENST00000409894 RANGAP1P46060 587 aaPredicted RBP13.66□□□□□ -0.22
POLR1B-203ENST00000409894 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
POLR1B-203ENST00000409894 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
POLR1B-203ENST00000409894 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.23
POLR1B-203ENST00000409894 UBTFP17480 764 aaKnown RBP13.47□□□□□ -0.25
POLR1B-203ENST00000409894 ATP1B4Q9UN42 357 aaPredicted RBP13.43□□□□□ -0.26
POLR1B-203ENST00000409894 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
POLR1B-203ENST00000409894 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
POLR1B-203ENST00000409894 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
POLR1B-203ENST00000409894 DIEXFQ68CQ4 756 aaKnown RBP13.34□□□□□ -0.27
POLR1B-203ENST00000409894 RTL5Q5HYW3 569 aaPredicted RBP13.31□□□□□ -0.28
POLR1B-203ENST00000409894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
POLR1B-203ENST00000409894 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
POLR1B-203ENST00000409894 CHIC1Q5VXU3 224 aa13.21□□□□□ -0.29
POLR1B-203ENST00000409894 ITGAEP38570 1179 aa13.21□□□□□ -0.29
POLR1B-203ENST00000409894 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
POLR1B-203ENST00000409894 BCANQ96GW7 911 aa13.19□□□□□ -0.3
POLR1B-203ENST00000409894 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
POLR1B-203ENST00000409894 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
POLR1B-203ENST00000409894 ABCC9O60706 1549 aa13.09□□□□□ -0.31
POLR1B-203ENST00000409894 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
POLR1B-203ENST00000409894 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
POLR1B-203ENST00000409894 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
POLR1B-203ENST00000409894 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
POLR1B-203ENST00000409894 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
POLR1B-203ENST00000409894 ANP32CO43423 234 aa12.82□□□□□ -0.36
POLR1B-203ENST00000409894 NEUROD1Q13562 356 aa12.81□□□□□ -0.36
POLR1B-203ENST00000409894 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
POLR1B-203ENST00000409894 ANP32AP39687 249 aaKnown RBP12.78□□□□□ -0.36
POLR1B-203ENST00000409894 FKBP8Q14318 412 aa12.75□□□□□ -0.37
POLR1B-203ENST00000409894 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
POLR1B-203ENST00000409894 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
POLR1B-203ENST00000409894 FAM50AQ14320 339 aaKnown RBP12.72□□□□□ -0.37
POLR1B-203ENST00000409894 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
POLR1B-203ENST00000409894 NBR1Q14596 966 aa12.66□□□□□ -0.38
POLR1B-203ENST00000409894 GLIPR1L2Q4G1C9 344 aa12.65□□□□□ -0.38
POLR1B-203ENST00000409894 TRIM52Q96A61 297 aa12.65□□□□□ -0.38
POLR1B-203ENST00000409894 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
POLR1B-203ENST00000409894 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
POLR1B-203ENST00000409894 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
POLR1B-203ENST00000409894 HNRNPUQ00839 825 aaKnown RBP eCLIP12.55□□□□□ -0.4
POLR1B-203ENST00000409894 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
POLR1B-203ENST00000409894 ANP32EQ9BTT0 268 aa12.51□□□□□ -0.41
POLR1B-203ENST00000409894 ARXQ96QS3 562 aa12.51□□□□□ -0.41
POLR1B-203ENST00000409894 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
POLR1B-203ENST00000409894 DDX10Q13206 875 aaKnown RBP12.5□□□□□ -0.41
POLR1B-203ENST00000409894 MIER1Q8N108 512 aa12.49□□□□□ -0.41
POLR1B-203ENST00000409894 CCDC136Q96JN2 1154 aa12.46□□□□□ -0.41
POLR1B-203ENST00000409894 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-203ENST00000409894 FAM9BQ8IZU0 186 aa12.45□□□□□ -0.42
POLR1B-203ENST00000409894 HSP90AA1P07900 732 aaKnown RBP12.44□□□□□ -0.42
POLR1B-203ENST00000409894 SALL2Q9Y467 1007 aaPredicted RBP12.4□□□□□ -0.42
POLR1B-203ENST00000409894 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
POLR1B-203ENST00000409894 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
POLR1B-203ENST00000409894 DCAF1Q9Y4B6 1507 aa12.34□□□□□ -0.43
POLR1B-203ENST00000409894 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
POLR1B-203ENST00000409894 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
POLR1B-203ENST00000409894 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
POLR1B-203ENST00000409894 MRS2Q9HD23 443 aa12.28□□□□□ -0.44
POLR1B-203ENST00000409894 NEFMP07197 916 aa12.28□□□□□ -0.44
POLR1B-203ENST00000409894 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.45
POLR1B-203ENST00000409894 TMC1Q8TDI8 760 aa12.26□□□□□ -0.45
POLR1B-203ENST00000409894 P3H3Q8IVL6 736 aa12.26□□□□□ -0.45
POLR1B-203ENST00000409894 FBLN2P98095 1184 aa12.26□□□□□ -0.45
POLR1B-203ENST00000409894 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.23□□□□□ -0.45
POLR1B-203ENST00000409894 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
POLR1B-203ENST00000409894 ERICH6BQ5W0A0 696 aa12.22□□□□□ -0.45
POLR1B-203ENST00000409894 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
POLR1B-203ENST00000409894 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
POLR1B-203ENST00000409894 LAS1LQ9Y4W2 734 aaKnown RBP12.19□□□□□ -0.46
POLR1B-203ENST00000409894 NAP1L5Q96NT1 182 aaPredicted RBP12.17□□□□□ -0.46
POLR1B-203ENST00000409894 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
POLR1B-203ENST00000409894 SENP3-EIF4A1A0A087X0R7 540 aa12.16□□□□□ -0.46
POLR1B-203ENST00000409894 DEKP35659 375 aaKnown RBP12.16□□□□□ -0.46
POLR1B-203ENST00000409894 PPM1GO15355 546 aaPredicted RBP12.15□□□□□ -0.46
POLR1B-203ENST00000409894 TNNT2P45379 298 aaPredicted RBP12.15□□□□□ -0.46
POLR1B-203ENST00000409894 NOP58Q9Y2X3 529 aaKnown RBP12.15□□□□□ -0.47
POLR1B-203ENST00000409894 BECN1Q14457 450 aa12.13□□□□□ -0.47
POLR1B-203ENST00000409894 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-203ENST00000409894 RBM19Q9Y4C8 960 aaKnown RBP12.09□□□□□ -0.47
POLR1B-203ENST00000409894 WDR43Q15061 677 aaKnown RBP eCLIP12.08□□□□□ -0.48
POLR1B-203ENST00000409894 PPP4R2Q9NY27 417 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms