RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.07
POLR1B-209ENST00000448770 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
POLR1B-209ENST00000448770 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
POLR1B-209ENST00000448770 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
POLR1B-209ENST00000448770 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
POLR1B-209ENST00000448770 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
POLR1B-209ENST00000448770 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
POLR1B-209ENST00000448770 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
POLR1B-209ENST00000448770 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
POLR1B-209ENST00000448770 HRCP23327 699 aa22.79■■□□□ 1.24
POLR1B-209ENST00000448770 PCGF6Q9BYE7 350 aa22.65■■□□□ 1.22
POLR1B-209ENST00000448770 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
POLR1B-209ENST00000448770 PPARGC1BQ86YN6 1023 aaKnown RBP22.44■■□□□ 1.18
POLR1B-209ENST00000448770 ABCC9O60706 1549 aa22.43■■□□□ 1.18
POLR1B-209ENST00000448770 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
POLR1B-209ENST00000448770 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
POLR1B-209ENST00000448770 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
POLR1B-209ENST00000448770 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
POLR1B-209ENST00000448770 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
POLR1B-209ENST00000448770 NACADO15069 1562 aa21.94■■□□□ 1.1
POLR1B-209ENST00000448770 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
POLR1B-209ENST00000448770 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
POLR1B-209ENST00000448770 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
POLR1B-209ENST00000448770 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
POLR1B-209ENST00000448770 WIZO95785 1651 aa21.72■■□□□ 1.07
POLR1B-209ENST00000448770 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
POLR1B-209ENST00000448770 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
POLR1B-209ENST00000448770 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
POLR1B-209ENST00000448770 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
POLR1B-209ENST00000448770 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
POLR1B-209ENST00000448770 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
POLR1B-209ENST00000448770 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
POLR1B-209ENST00000448770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■□□□□ 0.99
POLR1B-209ENST00000448770 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
POLR1B-209ENST00000448770 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
POLR1B-209ENST00000448770 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
POLR1B-209ENST00000448770 SOGA1O94964 1423 aa21.17■□□□□ 0.98
POLR1B-209ENST00000448770 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
POLR1B-209ENST00000448770 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
POLR1B-209ENST00000448770 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
POLR1B-209ENST00000448770 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
POLR1B-209ENST00000448770 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
POLR1B-209ENST00000448770 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
POLR1B-209ENST00000448770 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
POLR1B-209ENST00000448770 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
POLR1B-209ENST00000448770 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.94
POLR1B-209ENST00000448770 EEA1Q15075 1411 aa20.89■□□□□ 0.93
POLR1B-209ENST00000448770 NEUROD1Q13562 356 aa20.88■□□□□ 0.93
POLR1B-209ENST00000448770 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
POLR1B-209ENST00000448770 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
POLR1B-209ENST00000448770 ACIN1Q9UKV3 1341 aaKnown RBP20.84■□□□□ 0.93
POLR1B-209ENST00000448770 DIEXFQ68CQ4 756 aaKnown RBP20.84■□□□□ 0.93
POLR1B-209ENST00000448770 SYNJ1O43426 1573 aa20.83■□□□□ 0.93
POLR1B-209ENST00000448770 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
POLR1B-209ENST00000448770 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
POLR1B-209ENST00000448770 KIF21BO75037 1637 aa20.7■□□□□ 0.9
POLR1B-209ENST00000448770 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
POLR1B-209ENST00000448770 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.9
POLR1B-209ENST00000448770 CLIP1P30622 1438 aa20.64■□□□□ 0.89
POLR1B-209ENST00000448770 GTF3C3Q9Y5Q9 886 aa20.63■□□□□ 0.89
POLR1B-209ENST00000448770 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
POLR1B-209ENST00000448770 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
POLR1B-209ENST00000448770 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
POLR1B-209ENST00000448770 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.89
POLR1B-209ENST00000448770 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
POLR1B-209ENST00000448770 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
POLR1B-209ENST00000448770 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
POLR1B-209ENST00000448770 TOP2BQ02880 1626 aa20.47■□□□□ 0.87
POLR1B-209ENST00000448770 MIER1Q8N108 512 aa20.44■□□□□ 0.86
POLR1B-209ENST00000448770 YTHDC1Q96MU7 727 aaKnown RBP20.43■□□□□ 0.86
POLR1B-209ENST00000448770 BIVM-ERCC5R4GMW8 1640 aa20.4■□□□□ 0.86
POLR1B-209ENST00000448770 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
POLR1B-209ENST00000448770 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
POLR1B-209ENST00000448770 APLP2Q06481 763 aa20.33■□□□□ 0.84
POLR1B-209ENST00000448770 ERICH3Q5RHP9 1530 aa20.3■□□□□ 0.84
POLR1B-209ENST00000448770 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
POLR1B-209ENST00000448770 CUX1P39880 1505 aa20.28■□□□□ 0.84
POLR1B-209ENST00000448770 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.84
POLR1B-209ENST00000448770 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
POLR1B-209ENST00000448770 HMGXB3Q12766 1538 aa20.23■□□□□ 0.83
POLR1B-209ENST00000448770 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
POLR1B-209ENST00000448770 ARHGAP35Q9NRY4 1499 aa20.14■□□□□ 0.81
POLR1B-209ENST00000448770 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
POLR1B-209ENST00000448770 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
POLR1B-209ENST00000448770 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
POLR1B-209ENST00000448770 CFTRP13569 1480 aa20.09■□□□□ 0.81
POLR1B-209ENST00000448770 CUX2O14529 1486 aa20.07■□□□□ 0.8
POLR1B-209ENST00000448770 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
POLR1B-209ENST00000448770 ITGAEP38570 1179 aa19.98■□□□□ 0.79
POLR1B-209ENST00000448770 IGF1RP08069 1367 aa19.95■□□□□ 0.78
POLR1B-209ENST00000448770 MAPKBP1O60336 1514 aa19.95■□□□□ 0.78
POLR1B-209ENST00000448770 TIAM1Q13009 1591 aa19.92■□□□□ 0.78
POLR1B-209ENST00000448770 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
POLR1B-209ENST00000448770 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
POLR1B-209ENST00000448770 PHLDB1Q86UU1 1377 aa19.86■□□□□ 0.77
POLR1B-209ENST00000448770 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
POLR1B-209ENST00000448770 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
POLR1B-209ENST00000448770 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
POLR1B-209ENST00000448770 LRRC9Q6ZRR7 1453 aa19.83■□□□□ 0.77
POLR1B-209ENST00000448770 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms