RNA–Protein interactions for RNA: ENST00000556619.5

PAPOLA-221, Transcript of poly(A) polymerase alpha, humanhuman

TSL 3

Gene PAPOLA, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-221ENST00000556619 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
PAPOLA-221ENST00000556619 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
PAPOLA-221ENST00000556619 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
PAPOLA-221ENST00000556619 SENP3Q9H4L4 574 aaPredicted RBP21.26■□□□□ 0.99
PAPOLA-221ENST00000556619 PLPPR3Q6T4P5 718 aa20.2■□□□□ 0.82
PAPOLA-221ENST00000556619 FOXD1Q16676 465 aa19.73■□□□□ 0.75
PAPOLA-221ENST00000556619 ADRA2BP18089 450 aa19.19■□□□□ 0.66
PAPOLA-221ENST00000556619 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
PAPOLA-221ENST00000556619 PIAS4Q8N2W9 510 aaPredicted RBP18.69■□□□□ 0.58
PAPOLA-221ENST00000556619 MSH5O43196 834 aa18.07■□□□□ 0.48
PAPOLA-221ENST00000556619 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
PAPOLA-221ENST00000556619 KCNA4P22459 653 aa17.73■□□□□ 0.43
PAPOLA-221ENST00000556619 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
PAPOLA-221ENST00000556619 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
PAPOLA-221ENST00000556619 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
PAPOLA-221ENST00000556619 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
PAPOLA-221ENST00000556619 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
PAPOLA-221ENST00000556619 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
PAPOLA-221ENST00000556619 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
PAPOLA-221ENST00000556619 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
PAPOLA-221ENST00000556619 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
PAPOLA-221ENST00000556619 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
PAPOLA-221ENST00000556619 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
PAPOLA-221ENST00000556619 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
PAPOLA-221ENST00000556619 ZBTB22O15209 634 aa16.34■□□□□ 0.21
PAPOLA-221ENST00000556619 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
PAPOLA-221ENST00000556619 FOXD4L1Q9NU39 408 aa16.22■□□□□ 0.19
PAPOLA-221ENST00000556619 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
PAPOLA-221ENST00000556619 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
PAPOLA-221ENST00000556619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
PAPOLA-221ENST00000556619 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
PAPOLA-221ENST00000556619 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
PAPOLA-221ENST00000556619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
PAPOLA-221ENST00000556619 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
PAPOLA-221ENST00000556619 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
PAPOLA-221ENST00000556619 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
PAPOLA-221ENST00000556619 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
PAPOLA-221ENST00000556619 ATF5Q9Y2D1 282 aaPredicted RBP15.48■□□□□ 0.07
PAPOLA-221ENST00000556619 APLP2Q06481 763 aa15.35■□□□□ 0.05
PAPOLA-221ENST00000556619 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
PAPOLA-221ENST00000556619 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
PAPOLA-221ENST00000556619 CAPN15O75808 1086 aa15.19■□□□□ 0.02
PAPOLA-221ENST00000556619 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
PAPOLA-221ENST00000556619 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
PAPOLA-221ENST00000556619 POLA2Q14181 598 aa14.97□□□□□ -0.01
PAPOLA-221ENST00000556619 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
PAPOLA-221ENST00000556619 ABCB7O75027 752 aa14.95□□□□□ -0.02
PAPOLA-221ENST00000556619 DSG3P32926 999 aa14.85□□□□□ -0.03
PAPOLA-221ENST00000556619 FKBP8Q14318 412 aa14.83□□□□□ -0.04
PAPOLA-221ENST00000556619 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
PAPOLA-221ENST00000556619 FBLN2P98095 1184 aa14.76□□□□□ -0.05
PAPOLA-221ENST00000556619 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
PAPOLA-221ENST00000556619 SPDYE4A6NLX3 237 aa14.57□□□□□ -0.08
PAPOLA-221ENST00000556619 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
PAPOLA-221ENST00000556619 PROM2Q8N271 834 aa14.34□□□□□ -0.11
PAPOLA-221ENST00000556619 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
PAPOLA-221ENST00000556619 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
PAPOLA-221ENST00000556619 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
PAPOLA-221ENST00000556619 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
PAPOLA-221ENST00000556619 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
PAPOLA-221ENST00000556619 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
PAPOLA-221ENST00000556619 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
PAPOLA-221ENST00000556619 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
PAPOLA-221ENST00000556619 VASPP50552 380 aaPredicted RBP14.03□□□□□ -0.16
PAPOLA-221ENST00000556619 AKT1S1Q96B36 256 aa14□□□□□ -0.17
PAPOLA-221ENST00000556619 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
PAPOLA-221ENST00000556619 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
PAPOLA-221ENST00000556619 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
PAPOLA-221ENST00000556619 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
PAPOLA-221ENST00000556619 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
PAPOLA-221ENST00000556619 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
PAPOLA-221ENST00000556619 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
PAPOLA-221ENST00000556619 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
PAPOLA-221ENST00000556619 MIER1Q8N108 512 aa13.78□□□□□ -0.2
PAPOLA-221ENST00000556619 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
PAPOLA-221ENST00000556619 KLHL34Q8N239 644 aa13.72□□□□□ -0.21
PAPOLA-221ENST00000556619 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
PAPOLA-221ENST00000556619 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
PAPOLA-221ENST00000556619 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
PAPOLA-221ENST00000556619 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
PAPOLA-221ENST00000556619 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
PAPOLA-221ENST00000556619 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
PAPOLA-221ENST00000556619 PKD2Q13563 968 aa13.48□□□□□ -0.25
PAPOLA-221ENST00000556619 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
PAPOLA-221ENST00000556619 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
PAPOLA-221ENST00000556619 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
PAPOLA-221ENST00000556619 NUBP1P53384 320 aa13.41□□□□□ -0.26
PAPOLA-221ENST00000556619 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
PAPOLA-221ENST00000556619 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
PAPOLA-221ENST00000556619 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
PAPOLA-221ENST00000556619 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
PAPOLA-221ENST00000556619 NPM1P06748 294 aaKnown RBP eCLIP13.34□□□□□ -0.27
PAPOLA-221ENST00000556619 FARP1Q9Y4F1 1045 aaPredicted RBP13.34□□□□□ -0.27
PAPOLA-221ENST00000556619 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
PAPOLA-221ENST00000556619 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
PAPOLA-221ENST00000556619 FAM212AQ96EL1 285 aa13.3□□□□□ -0.28
PAPOLA-221ENST00000556619 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
PAPOLA-221ENST00000556619 GSE1Q14687 1217 aa13.29□□□□□ -0.28
PAPOLA-221ENST00000556619 RGL2O15211 777 aa13.24□□□□□ -0.29
PAPOLA-221ENST00000556619 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms