RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 NISCHQ9Y2I1 1504 aa20.86■□□□□ 0.93
POLR1B-202ENST00000333990 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
POLR1B-202ENST00000333990 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
POLR1B-202ENST00000333990 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
POLR1B-202ENST00000333990 ABCC9O60706 1549 aa17.95■□□□□ 0.46
POLR1B-202ENST00000333990 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
POLR1B-202ENST00000333990 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
POLR1B-202ENST00000333990 APLP2Q06481 763 aa17.84■□□□□ 0.45
POLR1B-202ENST00000333990 TRIM41Q8WV44 630 aa17.75■□□□□ 0.43
POLR1B-202ENST00000333990 CCDC180Q9P1Z9 1646 aa17.53■□□□□ 0.4
POLR1B-202ENST00000333990 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
POLR1B-202ENST00000333990 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
POLR1B-202ENST00000333990 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
POLR1B-202ENST00000333990 ATP1B4Q9UN42 357 aaPredicted RBP17.29■□□□□ 0.36
POLR1B-202ENST00000333990 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
POLR1B-202ENST00000333990 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
POLR1B-202ENST00000333990 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
POLR1B-202ENST00000333990 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
POLR1B-202ENST00000333990 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
POLR1B-202ENST00000333990 PCGF6Q9BYE7 350 aa17.03■□□□□ 0.32
POLR1B-202ENST00000333990 NACADO15069 1562 aa16.97■□□□□ 0.31
POLR1B-202ENST00000333990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
POLR1B-202ENST00000333990 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
POLR1B-202ENST00000333990 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
POLR1B-202ENST00000333990 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
POLR1B-202ENST00000333990 LOC105371045A0A1W2PR82 267 aa16.75■□□□□ 0.27
POLR1B-202ENST00000333990 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
POLR1B-202ENST00000333990 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
POLR1B-202ENST00000333990 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
POLR1B-202ENST00000333990 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
POLR1B-202ENST00000333990 FBLN2P98095 1184 aa16.65■□□□□ 0.26
POLR1B-202ENST00000333990 ITGAEP38570 1179 aa16.59■□□□□ 0.25
POLR1B-202ENST00000333990 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
POLR1B-202ENST00000333990 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
POLR1B-202ENST00000333990 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
POLR1B-202ENST00000333990 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
POLR1B-202ENST00000333990 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
POLR1B-202ENST00000333990 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
POLR1B-202ENST00000333990 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
POLR1B-202ENST00000333990 CDK11AQ9UQ88 783 aaPredicted RBP16.35■□□□□ 0.21
POLR1B-202ENST00000333990 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
POLR1B-202ENST00000333990 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
POLR1B-202ENST00000333990 CECR2Q9BXF3 1484 aa16.24■□□□□ 0.19
POLR1B-202ENST00000333990 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
POLR1B-202ENST00000333990 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
POLR1B-202ENST00000333990 CHMP7Q8WUX9 453 aaPredicted RBP16.22■□□□□ 0.19
POLR1B-202ENST00000333990 EEA1Q15075 1411 aa16.2■□□□□ 0.18
POLR1B-202ENST00000333990 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
POLR1B-202ENST00000333990 SMARCA2P51531 1590 aa16.16■□□□□ 0.18
POLR1B-202ENST00000333990 ERCC6Q03468 1493 aa16.15■□□□□ 0.18
POLR1B-202ENST00000333990 ARID3CA6NKF2 412 aa16.14■□□□□ 0.17
POLR1B-202ENST00000333990 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
POLR1B-202ENST00000333990 HRCP23327 699 aa16.09■□□□□ 0.17
POLR1B-202ENST00000333990 KIF27Q86VH2 1401 aa16.08■□□□□ 0.16
POLR1B-202ENST00000333990 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
POLR1B-202ENST00000333990 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
POLR1B-202ENST00000333990 NEFLP07196 543 aa16.03■□□□□ 0.16
POLR1B-202ENST00000333990 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
POLR1B-202ENST00000333990 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
POLR1B-202ENST00000333990 CLIP1P30622 1438 aa15.97■□□□□ 0.15
POLR1B-202ENST00000333990 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
POLR1B-202ENST00000333990 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
POLR1B-202ENST00000333990 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
POLR1B-202ENST00000333990 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
POLR1B-202ENST00000333990 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
POLR1B-202ENST00000333990 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
POLR1B-202ENST00000333990 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
POLR1B-202ENST00000333990 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
POLR1B-202ENST00000333990 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
POLR1B-202ENST00000333990 TSPY4P0CV99 314 aa15.88■□□□□ 0.13
POLR1B-202ENST00000333990 TSPY10P0CW01 314 aa15.88■□□□□ 0.13
POLR1B-202ENST00000333990 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
POLR1B-202ENST00000333990 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
POLR1B-202ENST00000333990 CADPSQ9ULU8 1353 aa15.86■□□□□ 0.13
POLR1B-202ENST00000333990 CUX2O14529 1486 aa15.84■□□□□ 0.13
POLR1B-202ENST00000333990 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
POLR1B-202ENST00000333990 TNIKQ9UKE5 1360 aa15.82■□□□□ 0.12
POLR1B-202ENST00000333990 CNGB1Q14028 1251 aaPredicted RBP15.81■□□□□ 0.12
POLR1B-202ENST00000333990 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
POLR1B-202ENST00000333990 CEP162Q5TB80 1403 aa15.79■□□□□ 0.12
POLR1B-202ENST00000333990 BCANQ96GW7 911 aa15.79■□□□□ 0.12
POLR1B-202ENST00000333990 WIZO95785 1651 aa15.79■□□□□ 0.12
POLR1B-202ENST00000333990 SOGA1O94964 1423 aa15.75■□□□□ 0.11
POLR1B-202ENST00000333990 ACIN1Q9UKV3 1341 aaKnown RBP15.75■□□□□ 0.11
POLR1B-202ENST00000333990 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
POLR1B-202ENST00000333990 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
POLR1B-202ENST00000333990 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
POLR1B-202ENST00000333990 CHIC2Q9UKJ5 165 aa15.71■□□□□ 0.11
POLR1B-202ENST00000333990 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
POLR1B-202ENST00000333990 TONSLQ96HA7 1378 aa15.69■□□□□ 0.1
POLR1B-202ENST00000333990 CHGAP10645 457 aaKnown RBP15.68■□□□□ 0.1
POLR1B-202ENST00000333990 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
POLR1B-202ENST00000333990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.12e-6■■□□□ 13
POLR1B-202ENST00000333990 CFDP1Q9UEE9 299 aaPredicted RBP15.65■□□□□ 0.1
POLR1B-202ENST00000333990 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
POLR1B-202ENST00000333990 ANP32CO43423 234 aa15.65■□□□□ 0.1
POLR1B-202ENST00000333990 NCAPD3P42695 1498 aa15.64■□□□□ 0.09
POLR1B-202ENST00000333990 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
POLR1B-202ENST00000333990 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
POLR1B-202ENST00000333990 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms