RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
POLR1B-216ENST00000537335 MYT1Q01538 1121 aa19.72■□□□□ 0.75
POLR1B-216ENST00000537335 CENPBP07199 599 aaPredicted RBP18.75■□□□□ 0.59
POLR1B-216ENST00000537335 ERICH6Q7L0X2 663 aa18.72■□□□□ 0.59
POLR1B-216ENST00000537335 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
POLR1B-216ENST00000537335 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
POLR1B-216ENST00000537335 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
POLR1B-216ENST00000537335 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
POLR1B-216ENST00000537335 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
POLR1B-216ENST00000537335 TTBK1Q5TCY1 1321 aaPredicted RBP18.28■□□□□ 0.52
POLR1B-216ENST00000537335 NEFLP07196 543 aa18■□□□□ 0.47
POLR1B-216ENST00000537335 HRCP23327 699 aa17.98■□□□□ 0.47
POLR1B-216ENST00000537335 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
POLR1B-216ENST00000537335 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
POLR1B-216ENST00000537335 APLP2Q06481 763 aa17.7■□□□□ 0.42
POLR1B-216ENST00000537335 NISCHQ9Y2I1 1504 aa17.6■□□□□ 0.41
POLR1B-216ENST00000537335 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.41
POLR1B-216ENST00000537335 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
POLR1B-216ENST00000537335 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
POLR1B-216ENST00000537335 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
POLR1B-216ENST00000537335 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
POLR1B-216ENST00000537335 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
POLR1B-216ENST00000537335 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
POLR1B-216ENST00000537335 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.35
POLR1B-216ENST00000537335 GLIPR1L2Q4G1C9 344 aa17.17■□□□□ 0.34
POLR1B-216ENST00000537335 EIF5BO60841 1220 aaKnown RBP17.17■□□□□ 0.34
POLR1B-216ENST00000537335 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
POLR1B-216ENST00000537335 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
POLR1B-216ENST00000537335 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.31
POLR1B-216ENST00000537335 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
POLR1B-216ENST00000537335 CDK11AQ9UQ88 783 aaPredicted RBP16.97■□□□□ 0.31
POLR1B-216ENST00000537335 BCANQ96GW7 911 aa16.95■□□□□ 0.3
POLR1B-216ENST00000537335 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
POLR1B-216ENST00000537335 CLSPNQ9HAW4 1339 aa16.79■□□□□ 0.28
POLR1B-216ENST00000537335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
POLR1B-216ENST00000537335 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
POLR1B-216ENST00000537335 RANGAP1P46060 587 aaPredicted RBP16.74■□□□□ 0.27
POLR1B-216ENST00000537335 BCL11AQ9H165 835 aa16.73■□□□□ 0.27
POLR1B-216ENST00000537335 ANP32AP39687 249 aaKnown RBP16.73■□□□□ 0.27
POLR1B-216ENST00000537335 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
POLR1B-216ENST00000537335 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
POLR1B-216ENST00000537335 NEUROD1Q13562 356 aa16.62■□□□□ 0.25
POLR1B-216ENST00000537335 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
POLR1B-216ENST00000537335 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
POLR1B-216ENST00000537335 ATP1B4Q9UN42 357 aaPredicted RBP16.55■□□□□ 0.24
POLR1B-216ENST00000537335 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
POLR1B-216ENST00000537335 NBR1Q14596 966 aa16.5■□□□□ 0.23
POLR1B-216ENST00000537335 FKBP8Q14318 412 aa16.47■□□□□ 0.23
POLR1B-216ENST00000537335 CNGB1Q14028 1251 aaPredicted RBP16.45■□□□□ 0.22
POLR1B-216ENST00000537335 ANP32BQ92688 251 aaKnown RBP16.45■□□□□ 0.22
POLR1B-216ENST00000537335 ANP32CO43423 234 aa16.44■□□□□ 0.22
POLR1B-216ENST00000537335 NPM2Q86SE8 214 aaKnown RBP16.43■□□□□ 0.22
POLR1B-216ENST00000537335 ZBTB47Q9UFB7 747 aaPredicted RBP16.4■□□□□ 0.22
POLR1B-216ENST00000537335 ITGAEP38570 1179 aa16.4■□□□□ 0.22
POLR1B-216ENST00000537335 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
POLR1B-216ENST00000537335 ERICH6BQ5W0A0 696 aa16.24■□□□□ 0.19
POLR1B-216ENST00000537335 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.19
POLR1B-216ENST00000537335 NEFMP07197 916 aa16.14■□□□□ 0.17
POLR1B-216ENST00000537335 ARXQ96QS3 562 aa16.11■□□□□ 0.17
POLR1B-216ENST00000537335 CDK11BP21127 795 aaKnown RBP16.1■□□□□ 0.17
POLR1B-216ENST00000537335 NAP1L5Q96NT1 182 aaPredicted RBP16.09■□□□□ 0.17
POLR1B-216ENST00000537335 DEKP35659 375 aaKnown RBP16.08■□□□□ 0.16
POLR1B-216ENST00000537335 TRIM44Q96DX7 344 aaPredicted RBP16.07■□□□□ 0.16
POLR1B-216ENST00000537335 UPF2Q9HAU5 1272 aaKnown RBP16.06■□□□□ 0.16
POLR1B-216ENST00000537335 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
POLR1B-216ENST00000537335 HSP90AA1P07900 732 aaKnown RBP16.05■□□□□ 0.16
POLR1B-216ENST00000537335 NCLP19338 710 aaKnown RBP16.03■□□□□ 0.16
POLR1B-216ENST00000537335 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
POLR1B-216ENST00000537335 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.15
POLR1B-216ENST00000537335 PPM1GO15355 546 aaPredicted RBP16.01■□□□□ 0.15
POLR1B-216ENST00000537335 CANXP27824 592 aaKnown RBP16■□□□□ 0.15
POLR1B-216ENST00000537335 MIER1Q8N108 512 aa15.99■□□□□ 0.15
POLR1B-216ENST00000537335 DDRGK1Q96HY6 314 aa15.98■□□□□ 0.15
POLR1B-216ENST00000537335 NOP58Q9Y2X3 529 aaKnown RBP15.94■□□□□ 0.14
POLR1B-216ENST00000537335 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.93■□□□□ 0.14
POLR1B-216ENST00000537335 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
POLR1B-216ENST00000537335 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
POLR1B-216ENST00000537335 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
POLR1B-216ENST00000537335 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
POLR1B-216ENST00000537335 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
POLR1B-216ENST00000537335 FAM50AQ14320 339 aaKnown RBP15.84■□□□□ 0.13
POLR1B-216ENST00000537335 PRKCSHP14314 528 aaPredicted RBP15.83■□□□□ 0.12
POLR1B-216ENST00000537335 DDX10Q13206 875 aaKnown RBP15.83■□□□□ 0.12
POLR1B-216ENST00000537335 BECN1Q14457 450 aa15.82■□□□□ 0.12
POLR1B-216ENST00000537335 RBM19Q9Y4C8 960 aaKnown RBP15.8■□□□□ 0.12
POLR1B-216ENST00000537335 LAS1LQ9Y4W2 734 aaKnown RBP15.79■□□□□ 0.12
POLR1B-216ENST00000537335 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
POLR1B-216ENST00000537335 FAM9BQ8IZU0 186 aa15.78■□□□□ 0.12
POLR1B-216ENST00000537335 DNTTIP2Q5QJE6 756 aaKnown RBP15.77■□□□□ 0.12
POLR1B-216ENST00000537335 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
POLR1B-216ENST00000537335 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.73■□□□□ 0.11
POLR1B-216ENST00000537335 GOLGA6L22H0YM25 854 aa15.72■□□□□ 0.11
POLR1B-216ENST00000537335 PTMAP06454 111 aaKnown RBP15.72■□□□□ 0.11
POLR1B-216ENST00000537335 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
POLR1B-216ENST00000537335 PNNQ9H307 717 aaKnown RBP15.69■□□□□ 0.1
POLR1B-216ENST00000537335 ZNF326Q5BKZ1 582 aaKnown RBP15.69■□□□□ 0.1
POLR1B-216ENST00000537335 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
POLR1B-216ENST00000537335 PPP4R2Q9NY27 417 aa15.67■□□□□ 0.1
POLR1B-216ENST00000537335 RSPH6AQ9H0K4 717 aa15.67■□□□□ 0.1
POLR1B-216ENST00000537335 HSP90AA2PQ14568 343 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms